Hb_009492_020

Information

Type -
Description -
Location Contig9492: 23032-23430
Sequence    

Annotation

kegg
ID pop:POPTR_0017s06310g
description hypothetical protein
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067L2Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23768 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009492_020 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_003589_100 0.0474668268 - - hypothetical protein JCGZ_03338 [Jatropha curcas]
3 Hb_000805_220 0.1122639703 - - polyprotein [Citrus endogenous pararetrovirus]
4 Hb_002837_080 0.1218755875 - - acyltransferase, putative [Ricinus communis]
5 Hb_002060_070 0.1307251613 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
6 Hb_156850_050 0.1359601849 - - PREDICTED: uncharacterized protein LOC105635250 [Jatropha curcas]
7 Hb_000930_020 0.145820817 - - hypothetical protein PRUPE_ppa026493mg [Prunus persica]
8 Hb_000096_050 0.1531734862 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001379_080 0.1608242987 - - PREDICTED: WAT1-related protein At5g07050-like [Vitis vinifera]
10 Hb_082972_010 0.1652525317 - - -
11 Hb_061783_010 0.1656385534 - - PREDICTED: uncharacterized protein LOC105124983 isoform X4 [Populus euphratica]
12 Hb_000984_110 0.1745868625 - - hypothetical protein JCGZ_15953 [Jatropha curcas]
13 Hb_001817_110 0.1774119181 - - hypothetical protein JCGZ_15340 [Jatropha curcas]
14 Hb_029238_040 0.1857279285 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
15 Hb_100526_020 0.1858386616 - - hypothetical protein POPTR_0003s09340g [Populus trichocarpa]
16 Hb_030949_010 0.1868984642 - - hypothetical protein POPTR_0001s24140g [Populus trichocarpa]
17 Hb_004102_200 0.1936812958 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
18 Hb_000974_030 0.1973826933 - - PREDICTED: uncharacterized protein LOC105128463 isoform X1 [Populus euphratica]
19 Hb_000953_110 0.2011421732 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
20 Hb_005048_090 0.2042921555 - - PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_009492_020 Hb_009492_020 Hb_003589_100 Hb_003589_100 Hb_009492_020--Hb_003589_100 Hb_000805_220 Hb_000805_220 Hb_009492_020--Hb_000805_220 Hb_002837_080 Hb_002837_080 Hb_009492_020--Hb_002837_080 Hb_002060_070 Hb_002060_070 Hb_009492_020--Hb_002060_070 Hb_156850_050 Hb_156850_050 Hb_009492_020--Hb_156850_050 Hb_000930_020 Hb_000930_020 Hb_009492_020--Hb_000930_020 Hb_003589_100--Hb_156850_050 Hb_003589_100--Hb_002837_080 Hb_003589_100--Hb_000805_220 Hb_061783_010 Hb_061783_010 Hb_003589_100--Hb_061783_010 Hb_000953_110 Hb_000953_110 Hb_003589_100--Hb_000953_110 Hb_006501_140 Hb_006501_140 Hb_000805_220--Hb_006501_140 Hb_000805_220--Hb_000930_020 Hb_000805_220--Hb_002060_070 Hb_100526_020 Hb_100526_020 Hb_000805_220--Hb_100526_020 Hb_000096_050 Hb_000096_050 Hb_000805_220--Hb_000096_050 Hb_001817_110 Hb_001817_110 Hb_002837_080--Hb_001817_110 Hb_082972_010 Hb_082972_010 Hb_002837_080--Hb_082972_010 Hb_002837_080--Hb_002060_070 Hb_043127_010 Hb_043127_010 Hb_002837_080--Hb_043127_010 Hb_013407_010 Hb_013407_010 Hb_002837_080--Hb_013407_010 Hb_002060_070--Hb_082972_010 Hb_002060_070--Hb_001817_110 Hb_001379_080 Hb_001379_080 Hb_002060_070--Hb_001379_080 Hb_002060_070--Hb_000096_050 Hb_002060_070--Hb_000930_020 Hb_029238_040 Hb_029238_040 Hb_156850_050--Hb_029238_040 Hb_004102_200 Hb_004102_200 Hb_156850_050--Hb_004102_200 Hb_007579_030 Hb_007579_030 Hb_156850_050--Hb_007579_030 Hb_156850_050--Hb_061783_010 Hb_001401_120 Hb_001401_120 Hb_156850_050--Hb_001401_120 Hb_156850_050--Hb_000096_050 Hb_000930_020--Hb_000096_050 Hb_000930_020--Hb_100526_020 Hb_000974_030 Hb_000974_030 Hb_000930_020--Hb_000974_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.296509 0 0.554177 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.276202

CAGE analysis