Hb_003589_100

Information

Type -
Description -
Location Contig3589: 83024-83257
Sequence    

Annotation

kegg
ID rcu:RCOM_0689500
description hypothetical protein
nr
ID KDP21667.1
description hypothetical protein JCGZ_03338 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JCY9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03338 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003589_100 0.0 - - hypothetical protein JCGZ_03338 [Jatropha curcas]
2 Hb_009492_020 0.0474668268 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
3 Hb_156850_050 0.1432225591 - - PREDICTED: uncharacterized protein LOC105635250 [Jatropha curcas]
4 Hb_002837_080 0.1471122696 - - acyltransferase, putative [Ricinus communis]
5 Hb_000805_220 0.1506857928 - - polyprotein [Citrus endogenous pararetrovirus]
6 Hb_061783_010 0.153777866 - - PREDICTED: uncharacterized protein LOC105124983 isoform X4 [Populus euphratica]
7 Hb_000953_110 0.171715829 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105629453 [Jatropha curcas]
8 Hb_002060_070 0.1743616773 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
9 Hb_000984_110 0.1750177558 - - hypothetical protein JCGZ_15953 [Jatropha curcas]
10 Hb_004529_010 0.1755578327 - - hypothetical protein JCGZ_27055 [Jatropha curcas]
11 Hb_000930_020 0.1823288716 - - hypothetical protein PRUPE_ppa026493mg [Prunus persica]
12 Hb_029238_040 0.1838170261 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
13 Hb_000096_050 0.1884308735 - - conserved hypothetical protein [Ricinus communis]
14 Hb_007545_220 0.1913246555 - - PREDICTED: uncharacterized protein LOC105632565 [Jatropha curcas]
15 Hb_000853_140 0.1919042488 - - hypothetical protein POPTR_0014s12080g [Populus trichocarpa]
16 Hb_002213_050 0.1927213042 - - PREDICTED: uncharacterized protein LOC105630318 isoform X3 [Jatropha curcas]
17 Hb_004102_200 0.1970481354 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
18 Hb_001379_080 0.1971782375 - - PREDICTED: WAT1-related protein At5g07050-like [Vitis vinifera]
19 Hb_004450_090 0.1987292163 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
20 Hb_004374_040 0.1990385585 - - PREDICTED: beta-carotene 3-hydroxylase, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_003589_100 Hb_003589_100 Hb_009492_020 Hb_009492_020 Hb_003589_100--Hb_009492_020 Hb_156850_050 Hb_156850_050 Hb_003589_100--Hb_156850_050 Hb_002837_080 Hb_002837_080 Hb_003589_100--Hb_002837_080 Hb_000805_220 Hb_000805_220 Hb_003589_100--Hb_000805_220 Hb_061783_010 Hb_061783_010 Hb_003589_100--Hb_061783_010 Hb_000953_110 Hb_000953_110 Hb_003589_100--Hb_000953_110 Hb_009492_020--Hb_000805_220 Hb_009492_020--Hb_002837_080 Hb_002060_070 Hb_002060_070 Hb_009492_020--Hb_002060_070 Hb_009492_020--Hb_156850_050 Hb_000930_020 Hb_000930_020 Hb_009492_020--Hb_000930_020 Hb_029238_040 Hb_029238_040 Hb_156850_050--Hb_029238_040 Hb_004102_200 Hb_004102_200 Hb_156850_050--Hb_004102_200 Hb_007579_030 Hb_007579_030 Hb_156850_050--Hb_007579_030 Hb_156850_050--Hb_061783_010 Hb_001401_120 Hb_001401_120 Hb_156850_050--Hb_001401_120 Hb_000096_050 Hb_000096_050 Hb_156850_050--Hb_000096_050 Hb_001817_110 Hb_001817_110 Hb_002837_080--Hb_001817_110 Hb_082972_010 Hb_082972_010 Hb_002837_080--Hb_082972_010 Hb_002837_080--Hb_002060_070 Hb_043127_010 Hb_043127_010 Hb_002837_080--Hb_043127_010 Hb_013407_010 Hb_013407_010 Hb_002837_080--Hb_013407_010 Hb_006501_140 Hb_006501_140 Hb_000805_220--Hb_006501_140 Hb_000805_220--Hb_000930_020 Hb_000805_220--Hb_002060_070 Hb_100526_020 Hb_100526_020 Hb_000805_220--Hb_100526_020 Hb_000805_220--Hb_000096_050 Hb_004450_090 Hb_004450_090 Hb_061783_010--Hb_004450_090 Hb_061783_010--Hb_004102_200 Hb_061783_010--Hb_029238_040 Hb_007545_220 Hb_007545_220 Hb_061783_010--Hb_007545_220 Hb_000984_110 Hb_000984_110 Hb_061783_010--Hb_000984_110 Hb_000953_110--Hb_007545_220 Hb_010217_020 Hb_010217_020 Hb_000953_110--Hb_010217_020 Hb_000853_140 Hb_000853_140 Hb_000953_110--Hb_000853_140 Hb_000197_260 Hb_000197_260 Hb_000953_110--Hb_000197_260 Hb_004158_040 Hb_004158_040 Hb_000953_110--Hb_004158_040 Hb_005183_070 Hb_005183_070 Hb_000953_110--Hb_005183_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.932229 0 2.08403 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.801548

CAGE analysis