Hb_001817_110

Information

Type -
Description -
Location Contig1817: 99640-99984
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP31460.1
description hypothetical protein JCGZ_15340 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGR8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15340 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001817_110 0.0 - - hypothetical protein JCGZ_15340 [Jatropha curcas]
2 Hb_082972_010 0.0302547192 - - -
3 Hb_043127_010 0.0537670402 - - PREDICTED: uncharacterized protein LOC105648822 [Jatropha curcas]
4 Hb_002837_080 0.0651327771 - - acyltransferase, putative [Ricinus communis]
5 Hb_002060_070 0.0876348429 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
6 Hb_013407_010 0.1176026738 - - hypothetical protein JCGZ_23575 [Jatropha curcas]
7 Hb_012691_060 0.1444252589 - - PREDICTED: isoflavone 2'-hydroxylase-like isoform X1 [Prunus mume]
8 Hb_000020_180 0.1565504632 - - laccase, putative [Ricinus communis]
9 Hb_001379_080 0.1603292541 - - PREDICTED: WAT1-related protein At5g07050-like [Vitis vinifera]
10 Hb_001709_080 0.1673876703 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
11 Hb_005018_030 0.168472234 - - hypothetical protein CICLE_v10019811mg [Citrus clementina]
12 Hb_005827_020 0.1699401928 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Populus euphratica]
13 Hb_000096_050 0.1718600082 - - conserved hypothetical protein [Ricinus communis]
14 Hb_009492_020 0.1774119181 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
15 Hb_156850_050 0.1789105771 - - PREDICTED: uncharacterized protein LOC105635250 [Jatropha curcas]
16 Hb_000752_040 0.1823235501 - - PREDICTED: uncharacterized protein LOC104884990 [Beta vulgaris subsp. vulgaris]
17 Hb_001366_360 0.1841765143 - - catalytic, putative [Ricinus communis]
18 Hb_019925_020 0.1857122912 - - electron carrier, putative [Ricinus communis]
19 Hb_000930_020 0.1931781095 - - hypothetical protein PRUPE_ppa026493mg [Prunus persica]
20 Hb_000012_380 0.197531602 transcription factor TF Family: MYB-related conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001817_110 Hb_001817_110 Hb_082972_010 Hb_082972_010 Hb_001817_110--Hb_082972_010 Hb_043127_010 Hb_043127_010 Hb_001817_110--Hb_043127_010 Hb_002837_080 Hb_002837_080 Hb_001817_110--Hb_002837_080 Hb_002060_070 Hb_002060_070 Hb_001817_110--Hb_002060_070 Hb_013407_010 Hb_013407_010 Hb_001817_110--Hb_013407_010 Hb_012691_060 Hb_012691_060 Hb_001817_110--Hb_012691_060 Hb_082972_010--Hb_002060_070 Hb_082972_010--Hb_002837_080 Hb_082972_010--Hb_043127_010 Hb_082972_010--Hb_012691_060 Hb_001379_080 Hb_001379_080 Hb_082972_010--Hb_001379_080 Hb_043127_010--Hb_002837_080 Hb_043127_010--Hb_013407_010 Hb_043127_010--Hb_002060_070 Hb_043127_010--Hb_012691_060 Hb_002837_080--Hb_002060_070 Hb_002837_080--Hb_013407_010 Hb_009492_020 Hb_009492_020 Hb_002837_080--Hb_009492_020 Hb_002060_070--Hb_001379_080 Hb_000096_050 Hb_000096_050 Hb_002060_070--Hb_000096_050 Hb_000930_020 Hb_000930_020 Hb_002060_070--Hb_000930_020 Hb_005827_020 Hb_005827_020 Hb_013407_010--Hb_005827_020 Hb_001709_080 Hb_001709_080 Hb_013407_010--Hb_001709_080 Hb_000311_100 Hb_000311_100 Hb_013407_010--Hb_000311_100 Hb_005018_030 Hb_005018_030 Hb_012691_060--Hb_005018_030 Hb_005183_030 Hb_005183_030 Hb_012691_060--Hb_005183_030 Hb_019925_020 Hb_019925_020 Hb_012691_060--Hb_019925_020 Hb_037519_010 Hb_037519_010 Hb_012691_060--Hb_037519_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.16092 0 0.381351 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.422071

CAGE analysis