Hb_043127_010

Information

Type -
Description -
Location Contig43127: 325-1750
Sequence    

Annotation

kegg
ID csv:101232437
description uncharacterized LOC101232437
nr
ID XP_012090717.1
description PREDICTED: uncharacterized protein LOC105648822 [Jatropha curcas]
swissprot
ID P92519
description Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1
trembl
ID A5C035
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016409 PE=4 SV=1
Gene Ontology
ID GO:0003676
description cysteine-rich rlk (receptor-like protein kinase)

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_043127_010 0.0 - - PREDICTED: uncharacterized protein LOC105648822 [Jatropha curcas]
2 Hb_001817_110 0.0537670402 - - hypothetical protein JCGZ_15340 [Jatropha curcas]
3 Hb_082972_010 0.0733012318 - - -
4 Hb_002837_080 0.1158894575 - - acyltransferase, putative [Ricinus communis]
5 Hb_013407_010 0.119820079 - - hypothetical protein JCGZ_23575 [Jatropha curcas]
6 Hb_002060_070 0.1312995451 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
7 Hb_012691_060 0.1366294686 - - PREDICTED: isoflavone 2'-hydroxylase-like isoform X1 [Prunus mume]
8 Hb_000020_180 0.1473724468 - - laccase, putative [Ricinus communis]
9 Hb_005018_030 0.1521723359 - - hypothetical protein CICLE_v10019811mg [Citrus clementina]
10 Hb_005827_020 0.1574208321 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Populus euphratica]
11 Hb_001366_360 0.1733587257 - - catalytic, putative [Ricinus communis]
12 Hb_002471_280 0.1769556557 - - PREDICTED: cyclin-SDS [Jatropha curcas]
13 Hb_001221_250 0.1800400448 - - -
14 Hb_019925_010 0.1804890616 - - PREDICTED: long-chain-alcohol oxidase FAO4A-like [Jatropha curcas]
15 Hb_000752_040 0.186389866 - - PREDICTED: uncharacterized protein LOC104884990 [Beta vulgaris subsp. vulgaris]
16 Hb_001709_080 0.1865181386 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
17 Hb_019925_020 0.1899113931 - - electron carrier, putative [Ricinus communis]
18 Hb_125181_010 0.1902197374 - - PREDICTED: uncharacterized protein LOC104115096 [Nicotiana tomentosiformis]
19 Hb_001379_080 0.1945429792 - - PREDICTED: WAT1-related protein At5g07050-like [Vitis vinifera]
20 Hb_001186_040 0.1963766776 - - Peroxidase 3 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_043127_010 Hb_043127_010 Hb_001817_110 Hb_001817_110 Hb_043127_010--Hb_001817_110 Hb_082972_010 Hb_082972_010 Hb_043127_010--Hb_082972_010 Hb_002837_080 Hb_002837_080 Hb_043127_010--Hb_002837_080 Hb_013407_010 Hb_013407_010 Hb_043127_010--Hb_013407_010 Hb_002060_070 Hb_002060_070 Hb_043127_010--Hb_002060_070 Hb_012691_060 Hb_012691_060 Hb_043127_010--Hb_012691_060 Hb_001817_110--Hb_082972_010 Hb_001817_110--Hb_002837_080 Hb_001817_110--Hb_002060_070 Hb_001817_110--Hb_013407_010 Hb_001817_110--Hb_012691_060 Hb_082972_010--Hb_002060_070 Hb_082972_010--Hb_002837_080 Hb_082972_010--Hb_012691_060 Hb_001379_080 Hb_001379_080 Hb_082972_010--Hb_001379_080 Hb_002837_080--Hb_002060_070 Hb_002837_080--Hb_013407_010 Hb_009492_020 Hb_009492_020 Hb_002837_080--Hb_009492_020 Hb_005827_020 Hb_005827_020 Hb_013407_010--Hb_005827_020 Hb_001709_080 Hb_001709_080 Hb_013407_010--Hb_001709_080 Hb_000311_100 Hb_000311_100 Hb_013407_010--Hb_000311_100 Hb_002060_070--Hb_001379_080 Hb_000096_050 Hb_000096_050 Hb_002060_070--Hb_000096_050 Hb_000930_020 Hb_000930_020 Hb_002060_070--Hb_000930_020 Hb_005018_030 Hb_005018_030 Hb_012691_060--Hb_005018_030 Hb_005183_030 Hb_005183_030 Hb_012691_060--Hb_005183_030 Hb_019925_020 Hb_019925_020 Hb_012691_060--Hb_019925_020 Hb_037519_010 Hb_037519_010 Hb_012691_060--Hb_037519_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0303286 0 0.0790095 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.108855

CAGE analysis