Hb_020301_010

Information

Type -
Description -
Location Contig20301: 22696-25212
Sequence    

Annotation

kegg
ID rcu:RCOM_0705970
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_002516084.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID B9DFU2
description Cytochrome P450 711A1 OS=Arabidopsis thaliana GN=CYP711A1 PE=2 SV=1
trembl
ID B9RQR5
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0705970 PE=3 SV=1
Gene Ontology
ID GO:0005622
description cytochrome p450 711a1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20836: 22691-25115
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020301_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_001295_050 0.1081026586 - - PREDICTED: uncharacterized protein LOC101503108 isoform X1 [Cicer arietinum]
3 Hb_005643_080 0.1281379416 - - hypothetical protein POPTR_0001s12740g [Populus trichocarpa]
4 Hb_000172_070 0.1288858439 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
5 Hb_005396_030 0.1337551601 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004586_230 0.1350610816 - - conserved hypothetical protein [Ricinus communis]
7 Hb_010267_030 0.139964623 - - DUF26 domain-containing protein 1 precursor, putative [Ricinus communis]
8 Hb_000984_110 0.1422789632 - - hypothetical protein JCGZ_15953 [Jatropha curcas]
9 Hb_000403_100 0.1463623152 - - PREDICTED: ras-related protein Rab7 [Jatropha curcas]
10 Hb_001699_030 0.1486356547 transcription factor TF Family: Orphans PREDICTED: histidine kinase 1 isoform X1 [Jatropha curcas]
11 Hb_005048_090 0.1489779473 - - PREDICTED: glycine-rich cell wall structural protein 2 [Jatropha curcas]
12 Hb_005588_130 0.1495952931 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001318_230 0.1501184917 - - Boron transporter, putative [Ricinus communis]
14 Hb_000342_120 0.1524162881 - - PREDICTED: probable protein phosphatase 2C 72 [Jatropha curcas]
15 Hb_007292_050 0.1547552659 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
16 Hb_000732_100 0.1550397673 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
17 Hb_000230_550 0.1556752618 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic [Jatropha curcas]
18 Hb_009476_160 0.1595556999 - - RING-H2 finger protein ATL2N, putative [Ricinus communis]
19 Hb_111985_090 0.159767319 - - hypothetical protein RCOM_1595950 [Ricinus communis]
20 Hb_009787_020 0.1640357586 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]

Gene co-expression network

sample Hb_020301_010 Hb_020301_010 Hb_001295_050 Hb_001295_050 Hb_020301_010--Hb_001295_050 Hb_005643_080 Hb_005643_080 Hb_020301_010--Hb_005643_080 Hb_000172_070 Hb_000172_070 Hb_020301_010--Hb_000172_070 Hb_005396_030 Hb_005396_030 Hb_020301_010--Hb_005396_030 Hb_004586_230 Hb_004586_230 Hb_020301_010--Hb_004586_230 Hb_010267_030 Hb_010267_030 Hb_020301_010--Hb_010267_030 Hb_005048_090 Hb_005048_090 Hb_001295_050--Hb_005048_090 Hb_003145_030 Hb_003145_030 Hb_001295_050--Hb_003145_030 Hb_000984_110 Hb_000984_110 Hb_001295_050--Hb_000984_110 Hb_001295_050--Hb_010267_030 Hb_001295_050--Hb_000172_070 Hb_008566_070 Hb_008566_070 Hb_005643_080--Hb_008566_070 Hb_006951_010 Hb_006951_010 Hb_005643_080--Hb_006951_010 Hb_111985_090 Hb_111985_090 Hb_005643_080--Hb_111985_090 Hb_000604_050 Hb_000604_050 Hb_005643_080--Hb_000604_050 Hb_000201_070 Hb_000201_070 Hb_005643_080--Hb_000201_070 Hb_005643_080--Hb_010267_030 Hb_005618_010 Hb_005618_010 Hb_000172_070--Hb_005618_010 Hb_000172_070--Hb_010267_030 Hb_000172_070--Hb_005048_090 Hb_007292_050 Hb_007292_050 Hb_000172_070--Hb_007292_050 Hb_000230_550 Hb_000230_550 Hb_000172_070--Hb_000230_550 Hb_002170_010 Hb_002170_010 Hb_000172_070--Hb_002170_010 Hb_000403_100 Hb_000403_100 Hb_005396_030--Hb_000403_100 Hb_017700_030 Hb_017700_030 Hb_005396_030--Hb_017700_030 Hb_002035_130 Hb_002035_130 Hb_005396_030--Hb_002035_130 Hb_005396_030--Hb_111985_090 Hb_005396_030--Hb_005643_080 Hb_012395_260 Hb_012395_260 Hb_004586_230--Hb_012395_260 Hb_000702_040 Hb_000702_040 Hb_004586_230--Hb_000702_040 Hb_000365_190 Hb_000365_190 Hb_004586_230--Hb_000365_190 Hb_001587_220 Hb_001587_220 Hb_004586_230--Hb_001587_220 Hb_006573_060 Hb_006573_060 Hb_004586_230--Hb_006573_060 Hb_001195_650 Hb_001195_650 Hb_004586_230--Hb_001195_650 Hb_010267_030--Hb_000201_070 Hb_010267_030--Hb_005048_090 Hb_010267_030--Hb_005618_010 Hb_010267_030--Hb_002170_010 Hb_112145_010 Hb_112145_010 Hb_010267_030--Hb_112145_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.204158 13.0756 1.32061 14.9132 0.424209 0.560545
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0863321 0 0 0.695221 3.89511

CAGE analysis