Hb_000808_090

Information

Type -
Description -
Location Contig808: 94860-98183
Sequence    

Annotation

kegg
ID pop:POPTR_0005s02010g
description calmodulin-binding protein 60-C
nr
ID XP_012088938.1
description PREDICTED: uncharacterized protein LOC105647449 [Jatropha curcas]
swissprot
ID Q9FKL6
description Calmodulin-binding protein 60 B OS=Arabidopsis thaliana GN=CBP60B PE=2 SV=1
trembl
ID A0A067JTT6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23248 PE=4 SV=1
Gene Ontology
ID GO:0007165
description calmodulin-binding protein 60-c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59081: 94843-98460
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000808_090 0.0 - - PREDICTED: uncharacterized protein LOC105647449 [Jatropha curcas]
2 Hb_029622_080 0.0739737786 transcription factor TF Family: AP2 hypothetical protein JCGZ_26299 [Jatropha curcas]
3 Hb_000665_090 0.0946382509 - - conserved hypothetical protein [Ricinus communis]
4 Hb_032260_100 0.0958104238 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
5 Hb_000656_350 0.0987777544 - - PREDICTED: linoleate 13S-lipoxygenase 3-1, chloroplastic [Jatropha curcas]
6 Hb_000627_130 0.099267777 - - Polcalcin Jun o, putative [Ricinus communis]
7 Hb_124953_010 0.0993865414 - - hypothetical protein RCOM_1314600 [Ricinus communis]
8 Hb_000925_110 0.1056289999 - - Spotted leaf protein, putative [Ricinus communis]
9 Hb_002066_050 0.1086557638 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
10 Hb_158926_010 0.1105281567 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
11 Hb_010964_010 0.111942559 - - -
12 Hb_001894_060 0.1131381982 - - PREDICTED: uncharacterized protein LOC105644596 [Jatropha curcas]
13 Hb_007858_020 0.1133777235 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
14 Hb_002542_030 0.1146059999 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
15 Hb_005054_330 0.1153351201 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
16 Hb_001999_170 0.1171627594 - - PREDICTED: uncharacterized protein LOC105630609 [Jatropha curcas]
17 Hb_000164_160 0.1191550586 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
18 Hb_000032_150 0.1210286075 transcription factor TF Family: WRKY hypothetical protein RCOM_1691430 [Ricinus communis]
19 Hb_000571_030 0.1231830544 - - ammonium transporter, putative [Ricinus communis]
20 Hb_022137_020 0.123622367 transcription factor TF Family: AP2 PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]

Gene co-expression network

sample Hb_000808_090 Hb_000808_090 Hb_029622_080 Hb_029622_080 Hb_000808_090--Hb_029622_080 Hb_000665_090 Hb_000665_090 Hb_000808_090--Hb_000665_090 Hb_032260_100 Hb_032260_100 Hb_000808_090--Hb_032260_100 Hb_000656_350 Hb_000656_350 Hb_000808_090--Hb_000656_350 Hb_000627_130 Hb_000627_130 Hb_000808_090--Hb_000627_130 Hb_124953_010 Hb_124953_010 Hb_000808_090--Hb_124953_010 Hb_029622_080--Hb_032260_100 Hb_029622_080--Hb_000656_350 Hb_000221_280 Hb_000221_280 Hb_029622_080--Hb_000221_280 Hb_000571_030 Hb_000571_030 Hb_029622_080--Hb_000571_030 Hb_001257_040 Hb_001257_040 Hb_029622_080--Hb_001257_040 Hb_002066_050 Hb_002066_050 Hb_000665_090--Hb_002066_050 Hb_000714_080 Hb_000714_080 Hb_000665_090--Hb_000714_080 Hb_000925_110 Hb_000925_110 Hb_000665_090--Hb_000925_110 Hb_101058_020 Hb_101058_020 Hb_000665_090--Hb_101058_020 Hb_000904_110 Hb_000904_110 Hb_000665_090--Hb_000904_110 Hb_032260_100--Hb_000656_350 Hb_000529_050 Hb_000529_050 Hb_032260_100--Hb_000529_050 Hb_007441_150 Hb_007441_150 Hb_032260_100--Hb_007441_150 Hb_032260_100--Hb_000571_030 Hb_000656_350--Hb_000925_110 Hb_000656_350--Hb_000571_030 Hb_000032_150 Hb_000032_150 Hb_000656_350--Hb_000032_150 Hb_007858_020 Hb_007858_020 Hb_000627_130--Hb_007858_020 Hb_000627_130--Hb_124953_010 Hb_029664_010 Hb_029664_010 Hb_000627_130--Hb_029664_010 Hb_001153_250 Hb_001153_250 Hb_000627_130--Hb_001153_250 Hb_109591_010 Hb_109591_010 Hb_000627_130--Hb_109591_010 Hb_005054_330 Hb_005054_330 Hb_000627_130--Hb_005054_330 Hb_003207_230 Hb_003207_230 Hb_124953_010--Hb_003207_230 Hb_124953_010--Hb_000032_150 Hb_124953_010--Hb_007858_020 Hb_124953_010--Hb_005054_330 Hb_047955_010 Hb_047955_010 Hb_124953_010--Hb_047955_010 Hb_004032_220 Hb_004032_220 Hb_124953_010--Hb_004032_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.77973 185.861 102.12 63.4847 1.3173 0.570544
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.12014 0.755446 0.51147 2.94858 7.67593

CAGE analysis