Hb_029689_010

Information

Type -
Description -
Location Contig29689: 77-2195
Sequence    

Annotation

kegg
ID cit:102623211
description putative disease resistance protein RGA1-like
nr
ID KDP43125.1
description hypothetical protein JCGZ_26658 [Jatropha curcas]
swissprot
ID Q7XBQ9
description Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1
trembl
ID A0A067LF36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029689_010 0.0 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
2 Hb_000059_260 0.132679465 - - PREDICTED: LOW QUALITY PROTEIN: peroxidase 60 [Jatropha curcas]
3 Hb_002311_150 0.1622850489 - - Protein COBRA precursor, putative [Ricinus communis]
4 Hb_183192_010 0.1732747908 - - PREDICTED: thioredoxin reductase NTRC [Sesamum indicum]
5 Hb_074184_010 0.1760964409 - - eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
6 Hb_007120_010 0.1765295827 - - PREDICTED: uncharacterized protein LOC105634737 [Jatropha curcas]
7 Hb_033149_020 0.1783106516 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
8 Hb_000819_040 0.178877381 - - ATP binding protein, putative [Ricinus communis]
9 Hb_065755_020 0.1808512203 - - choline monooxygenase, putative [Ricinus communis]
10 Hb_001989_060 0.1841935159 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105634562 isoform X2 [Jatropha curcas]
11 Hb_000451_040 0.1870482835 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001628_020 0.1872965977 - - receptor serine/threonine kinase, putative [Ricinus communis]
13 Hb_000284_180 0.1901513084 - - hypothetical protein EUGRSUZ_B01865 [Eucalyptus grandis]
14 Hb_002936_030 0.1982501314 - - PREDICTED: uncharacterized protein LOC105633479 isoform X1 [Jatropha curcas]
15 Hb_000221_230 0.1985540658 transcription factor TF Family: Jumonji PREDICTED: F-box protein At1g78280 [Jatropha curcas]
16 Hb_114674_010 0.2015024649 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
17 Hb_000045_140 0.2019135465 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
18 Hb_032202_050 0.2022218621 transcription factor TF Family: TCP conserved hypothetical protein [Ricinus communis]
19 Hb_033327_010 0.2027013327 - - SYM8 [Pisum sativum]
20 Hb_009040_010 0.2030802253 transcription factor TF Family: C2C2-CO-like zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_029689_010 Hb_029689_010 Hb_000059_260 Hb_000059_260 Hb_029689_010--Hb_000059_260 Hb_002311_150 Hb_002311_150 Hb_029689_010--Hb_002311_150 Hb_183192_010 Hb_183192_010 Hb_029689_010--Hb_183192_010 Hb_074184_010 Hb_074184_010 Hb_029689_010--Hb_074184_010 Hb_007120_010 Hb_007120_010 Hb_029689_010--Hb_007120_010 Hb_033149_020 Hb_033149_020 Hb_029689_010--Hb_033149_020 Hb_010964_010 Hb_010964_010 Hb_000059_260--Hb_010964_010 Hb_002960_100 Hb_002960_100 Hb_000059_260--Hb_002960_100 Hb_000819_040 Hb_000819_040 Hb_000059_260--Hb_000819_040 Hb_001310_010 Hb_001310_010 Hb_000059_260--Hb_001310_010 Hb_181810_010 Hb_181810_010 Hb_000059_260--Hb_181810_010 Hb_000805_040 Hb_000805_040 Hb_002311_150--Hb_000805_040 Hb_004586_130 Hb_004586_130 Hb_002311_150--Hb_004586_130 Hb_094437_050 Hb_094437_050 Hb_002311_150--Hb_094437_050 Hb_000594_110 Hb_000594_110 Hb_002311_150--Hb_000594_110 Hb_000680_180 Hb_000680_180 Hb_002311_150--Hb_000680_180 Hb_000373_250 Hb_000373_250 Hb_002311_150--Hb_000373_250 Hb_009979_010 Hb_009979_010 Hb_183192_010--Hb_009979_010 Hb_004495_010 Hb_004495_010 Hb_183192_010--Hb_004495_010 Hb_001628_020 Hb_001628_020 Hb_183192_010--Hb_001628_020 Hb_001369_670 Hb_001369_670 Hb_183192_010--Hb_001369_670 Hb_012022_020 Hb_012022_020 Hb_183192_010--Hb_012022_020 Hb_008203_020 Hb_008203_020 Hb_074184_010--Hb_008203_020 Hb_065755_020 Hb_065755_020 Hb_074184_010--Hb_065755_020 Hb_032202_050 Hb_032202_050 Hb_074184_010--Hb_032202_050 Hb_000221_230 Hb_000221_230 Hb_074184_010--Hb_000221_230 Hb_074184_010--Hb_004495_010 Hb_007120_010--Hb_000373_250 Hb_001989_060 Hb_001989_060 Hb_007120_010--Hb_001989_060 Hb_007120_010--Hb_000805_040 Hb_001863_270 Hb_001863_270 Hb_007120_010--Hb_001863_270 Hb_000045_140 Hb_000045_140 Hb_007120_010--Hb_000045_140 Hb_002498_250 Hb_002498_250 Hb_007120_010--Hb_002498_250 Hb_000610_060 Hb_000610_060 Hb_033149_020--Hb_000610_060 Hb_181824_010 Hb_181824_010 Hb_033149_020--Hb_181824_010 Hb_000451_040 Hb_000451_040 Hb_033149_020--Hb_000451_040 Hb_008380_010 Hb_008380_010 Hb_033149_020--Hb_008380_010 Hb_033149_020--Hb_000045_140 Hb_056012_010 Hb_056012_010 Hb_033149_020--Hb_056012_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.798725 4.43454 2.65733 1.59957 0.134639 0.298274
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0402497 0.204007 0.358691

CAGE analysis