Hb_000610_060

Information

Type -
Description -
Location Contig610: 42935-46204
Sequence    

Annotation

kegg
ID rcu:RCOM_1598830
description Cucumisin precursor, putative (EC:3.4.21.25)
nr
ID XP_012073747.1
description PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
swissprot
ID Q9LNU1
description CO(2)-response secreted protease OS=Arabidopsis thaliana GN=CRSP PE=2 SV=1
trembl
ID E6NTY7
description JHL20J20.3 protein OS=Jatropha curcas GN=JHL20J20.3 PE=4 SV=1
Gene Ontology
ID GO:0008236
description co -response secreted protease-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000610_060 0.0 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
2 Hb_033149_020 0.1027322137 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
3 Hb_007574_050 0.1274367131 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
4 Hb_008103_100 0.1283568792 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPS2 [Jatropha curcas]
5 Hb_004712_160 0.1320085205 - - hypothetical protein CICLE_v10024612mg [Citrus clementina]
6 Hb_011689_100 0.139433407 - - PREDICTED: uncharacterized protein LOC105631864 [Jatropha curcas]
7 Hb_001053_200 0.1403503349 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
8 Hb_098160_010 0.1483153303 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]
9 Hb_002122_030 0.1507317919 - - -
10 Hb_017857_010 0.1530125006 - - -
11 Hb_002445_130 0.1530343826 - - Disease resistance protein RGA2, putative [Ricinus communis]
12 Hb_003216_050 0.154116174 - - PREDICTED: OBERON-like protein [Jatropha curcas]
13 Hb_002910_010 0.1546456259 - - PREDICTED: uncharacterized protein LOC105635519 [Jatropha curcas]
14 Hb_005375_070 0.1557076169 transcription factor TF Family: MYB-related PREDICTED: protein LHY [Jatropha curcas]
15 Hb_000451_040 0.156937517 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000803_060 0.161301634 - - poly(p)/ATP NAD kinase, putative [Ricinus communis]
17 Hb_005000_050 0.1628428535 - - PREDICTED: tetraspanin-2 [Jatropha curcas]
18 Hb_000402_030 0.1643226184 - - PREDICTED: cysteine-rich receptor-like protein kinase 2 [Jatropha curcas]
19 Hb_000805_040 0.1652711524 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
20 Hb_011360_090 0.1657317563 - - PREDICTED: uncharacterized protein LOC105644141 [Jatropha curcas]

Gene co-expression network

sample Hb_000610_060 Hb_000610_060 Hb_033149_020 Hb_033149_020 Hb_000610_060--Hb_033149_020 Hb_007574_050 Hb_007574_050 Hb_000610_060--Hb_007574_050 Hb_008103_100 Hb_008103_100 Hb_000610_060--Hb_008103_100 Hb_004712_160 Hb_004712_160 Hb_000610_060--Hb_004712_160 Hb_011689_100 Hb_011689_100 Hb_000610_060--Hb_011689_100 Hb_001053_200 Hb_001053_200 Hb_000610_060--Hb_001053_200 Hb_181824_010 Hb_181824_010 Hb_033149_020--Hb_181824_010 Hb_000451_040 Hb_000451_040 Hb_033149_020--Hb_000451_040 Hb_008380_010 Hb_008380_010 Hb_033149_020--Hb_008380_010 Hb_000045_140 Hb_000045_140 Hb_033149_020--Hb_000045_140 Hb_056012_010 Hb_056012_010 Hb_033149_020--Hb_056012_010 Hb_098160_010 Hb_098160_010 Hb_007574_050--Hb_098160_010 Hb_001898_010 Hb_001898_010 Hb_007574_050--Hb_001898_010 Hb_005375_070 Hb_005375_070 Hb_007574_050--Hb_005375_070 Hb_002936_030 Hb_002936_030 Hb_007574_050--Hb_002936_030 Hb_000402_030 Hb_000402_030 Hb_007574_050--Hb_000402_030 Hb_001405_060 Hb_001405_060 Hb_007574_050--Hb_001405_060 Hb_008103_100--Hb_001053_200 Hb_001662_170 Hb_001662_170 Hb_008103_100--Hb_001662_170 Hb_012787_040 Hb_012787_040 Hb_008103_100--Hb_012787_040 Hb_004106_010 Hb_004106_010 Hb_008103_100--Hb_004106_010 Hb_003216_050 Hb_003216_050 Hb_008103_100--Hb_003216_050 Hb_000803_060 Hb_000803_060 Hb_008103_100--Hb_000803_060 Hb_004712_160--Hb_001898_010 Hb_004712_160--Hb_005375_070 Hb_000805_040 Hb_000805_040 Hb_004712_160--Hb_000805_040 Hb_002122_030 Hb_002122_030 Hb_004712_160--Hb_002122_030 Hb_005000_050 Hb_005000_050 Hb_004712_160--Hb_005000_050 Hb_004712_160--Hb_007574_050 Hb_011689_100--Hb_002122_030 Hb_011689_100--Hb_012787_040 Hb_011689_100--Hb_001053_200 Hb_011689_100--Hb_000803_060 Hb_002233_070 Hb_002233_070 Hb_011689_100--Hb_002233_070 Hb_001053_200--Hb_001662_170 Hb_001951_240 Hb_001951_240 Hb_001053_200--Hb_001951_240 Hb_000649_300 Hb_000649_300 Hb_001053_200--Hb_000649_300 Hb_005496_160 Hb_005496_160 Hb_001053_200--Hb_005496_160 Hb_004032_310 Hb_004032_310 Hb_001053_200--Hb_004032_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0819332 0.920963 0.397537 0.278704 0.0748248 0.027974
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0227069 0.0357328 0 0.170602 0.0755041

CAGE analysis