Hb_184008_010

Information

Type -
Description -
Location Contig184008: 109-1843
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa000939mg
description hypothetical protein
nr
ID XP_010088635.1
description putative LRR receptor-like serine/threonine-protein kinase [Morus notabilis]
swissprot
ID Q9SAH3
description Putative receptor-like protein kinase At1g80870 OS=Arabidopsis thaliana GN=At1g80870 PE=3 SV=1
trembl
ID W9R1X6
description Putative LRR receptor-like serine/threonine-protein kinase OS=Morus notabilis GN=L484_005094 PE=4 SV=1
Gene Ontology
ID GO:0000166
description lrr receptor-like serine threonine-protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_184008_010 0.0 - - putative LRR receptor-like serine/threonine-protein kinase [Morus notabilis]
2 Hb_013938_010 0.129386055 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like isoform X3 [Citrus sinensis]
3 Hb_002641_050 0.155324341 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 48 [Jatropha curcas]
4 Hb_000001_010 0.1594857058 - - PREDICTED: uncharacterized protein LOC105648961 [Jatropha curcas]
5 Hb_052434_010 0.1610876856 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 [Sesamum indicum]
6 Hb_001318_110 0.1633887185 - - PREDICTED: uncharacterized protein LOC105642677 [Jatropha curcas]
7 Hb_000008_430 0.1697181762 - - PREDICTED: zinc finger CCCH domain-containing protein 24 isoform X1 [Jatropha curcas]
8 Hb_025236_020 0.1698183351 transcription factor TF Family: bHLH hypothetical protein POPTR_0018s11800g [Populus trichocarpa]
9 Hb_001294_040 0.1717912102 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
10 Hb_012366_050 0.1766422338 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 [Jatropha curcas]
11 Hb_001158_120 0.1790218603 - - PREDICTED: uncharacterized protein LOC105648761 isoform X1 [Jatropha curcas]
12 Hb_001240_050 0.1810316211 - - PREDICTED: CSC1-like protein At1g32090 [Jatropha curcas]
13 Hb_001123_190 0.182550028 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 15-like [Jatropha curcas]
14 Hb_006681_030 0.1827516325 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Populus euphratica]
15 Hb_000111_390 0.1846998686 - - PREDICTED: uncharacterized protein LOC105631262 isoform X1 [Jatropha curcas]
16 Hb_002343_020 0.1850583672 - - PREDICTED: AT-hook motif nuclear-localized protein 1 [Jatropha curcas]
17 Hb_001016_140 0.1851450854 - - PREDICTED: uncharacterized protein LOC105647117 [Jatropha curcas]
18 Hb_004667_040 0.185837991 - - ATP binding protein, putative [Ricinus communis]
19 Hb_014361_170 0.1872457222 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 37 [Jatropha curcas]
20 Hb_001832_240 0.1894231166 - - PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_184008_010 Hb_184008_010 Hb_013938_010 Hb_013938_010 Hb_184008_010--Hb_013938_010 Hb_002641_050 Hb_002641_050 Hb_184008_010--Hb_002641_050 Hb_000001_010 Hb_000001_010 Hb_184008_010--Hb_000001_010 Hb_052434_010 Hb_052434_010 Hb_184008_010--Hb_052434_010 Hb_001318_110 Hb_001318_110 Hb_184008_010--Hb_001318_110 Hb_000008_430 Hb_000008_430 Hb_184008_010--Hb_000008_430 Hb_005649_010 Hb_005649_010 Hb_013938_010--Hb_005649_010 Hb_003964_010 Hb_003964_010 Hb_013938_010--Hb_003964_010 Hb_013938_010--Hb_001318_110 Hb_002343_020 Hb_002343_020 Hb_013938_010--Hb_002343_020 Hb_043987_010 Hb_043987_010 Hb_013938_010--Hb_043987_010 Hb_002641_050--Hb_001318_110 Hb_004667_040 Hb_004667_040 Hb_002641_050--Hb_004667_040 Hb_025236_020 Hb_025236_020 Hb_002641_050--Hb_025236_020 Hb_002641_050--Hb_013938_010 Hb_002641_050--Hb_002343_020 Hb_005628_050 Hb_005628_050 Hb_000001_010--Hb_005628_050 Hb_006925_060 Hb_006925_060 Hb_000001_010--Hb_006925_060 Hb_042098_010 Hb_042098_010 Hb_000001_010--Hb_042098_010 Hb_000001_010--Hb_052434_010 Hb_002107_110 Hb_002107_110 Hb_000001_010--Hb_002107_110 Hb_000495_050 Hb_000495_050 Hb_000001_010--Hb_000495_050 Hb_003529_230 Hb_003529_230 Hb_052434_010--Hb_003529_230 Hb_005814_010 Hb_005814_010 Hb_052434_010--Hb_005814_010 Hb_052434_010--Hb_025236_020 Hb_000359_260 Hb_000359_260 Hb_052434_010--Hb_000359_260 Hb_052434_010--Hb_002107_110 Hb_001318_110--Hb_005649_010 Hb_001832_240 Hb_001832_240 Hb_001318_110--Hb_001832_240 Hb_001318_110--Hb_005628_050 Hb_000031_160 Hb_000031_160 Hb_001318_110--Hb_000031_160 Hb_005724_050 Hb_005724_050 Hb_000008_430--Hb_005724_050 Hb_004032_090 Hb_004032_090 Hb_000008_430--Hb_004032_090 Hb_001294_040 Hb_001294_040 Hb_000008_430--Hb_001294_040 Hb_007290_070 Hb_007290_070 Hb_000008_430--Hb_007290_070 Hb_005539_100 Hb_005539_100 Hb_000008_430--Hb_005539_100 Hb_001205_180 Hb_001205_180 Hb_000008_430--Hb_001205_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.18956 12.5846 18.2528 6.16397 0.493493 0.876912
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.110881 0 1.11798 10.6099 3.81476

CAGE analysis