Hb_001085_150

Information

Type -
Description -
Location Contig1085: 105193-115007
Sequence    

Annotation

kegg
ID tcc:TCM_020313
description Purple acid phosphatase 15
nr
ID XP_007034350.1
description Purple acid phosphatase 15 [Theobroma cacao]
swissprot
ID Q9SFU3
description Purple acid phosphatase 15 OS=Arabidopsis thaliana GN=PAP15 PE=1 SV=1
trembl
ID A0A061EK97
description Purple acid phosphatase OS=Theobroma cacao GN=TCM_020313 PE=3 SV=1
Gene Ontology
ID GO:0003993
description purple acid phosphatase 15-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02568: 106549-106914 , PASA_asmbl_02569: 109680-109950 , PASA_asmbl_02570: 111349-113944 , PASA_asmbl_02571: 112804-113179 , PASA_asmbl_02572: 114304-114951
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001085_150 0.0 - - Purple acid phosphatase 15 [Theobroma cacao]
2 Hb_105328_010 0.1759504267 - - PREDICTED: low-temperature-induced cysteine proteinase-like [Jatropha curcas]
3 Hb_000804_020 0.1846566349 - - PREDICTED: aconitate hydratase, cytoplasmic [Jatropha curcas]
4 Hb_083940_010 0.1849259826 - - Zeamatin precursor, putative [Ricinus communis]
5 Hb_003025_030 0.1883354056 - - PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Jatropha curcas]
6 Hb_003659_010 0.1887046336 - - aldo/keto reductase AKR [Manihot esculenta]
7 Hb_005545_020 0.1988159743 - - endo beta n-acetylglucosaminidase, putative [Ricinus communis]
8 Hb_000465_150 0.2106426623 - - PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 [Jatropha curcas]
9 Hb_000189_170 0.2116254024 - - calcium ion binding protein, putative [Ricinus communis]
10 Hb_002597_020 0.21237687 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
11 Hb_006472_080 0.2128645364 - - -
12 Hb_000365_200 0.2135744943 - - PREDICTED: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Jatropha curcas]
13 Hb_007416_110 0.2197452674 - - PREDICTED: probable cyclic nucleotide-gated ion channel 14 isoform X1 [Jatropha curcas]
14 Hb_152868_030 0.2223557173 - - abhydrolase domain containing, putative [Ricinus communis]
15 Hb_003529_040 0.2244948865 - - PREDICTED: ATP phosphoribosyltransferase 2, chloroplastic-like [Jatropha curcas]
16 Hb_006472_070 0.2251133495 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
17 Hb_004883_020 0.2266872632 - - PREDICTED: uncharacterized protein LOC105647351 [Jatropha curcas]
18 Hb_001240_050 0.2274725729 - - PREDICTED: CSC1-like protein At1g32090 [Jatropha curcas]
19 Hb_008747_010 0.2276162869 - - PREDICTED: protein argonaute 2-like isoform X1 [Jatropha curcas]
20 Hb_011909_010 0.2276247575 - - PREDICTED: uncharacterized protein LOC100246941 [Vitis vinifera]

Gene co-expression network

sample Hb_001085_150 Hb_001085_150 Hb_105328_010 Hb_105328_010 Hb_001085_150--Hb_105328_010 Hb_000804_020 Hb_000804_020 Hb_001085_150--Hb_000804_020 Hb_083940_010 Hb_083940_010 Hb_001085_150--Hb_083940_010 Hb_003025_030 Hb_003025_030 Hb_001085_150--Hb_003025_030 Hb_003659_010 Hb_003659_010 Hb_001085_150--Hb_003659_010 Hb_005545_020 Hb_005545_020 Hb_001085_150--Hb_005545_020 Hb_000032_450 Hb_000032_450 Hb_105328_010--Hb_000032_450 Hb_105328_010--Hb_083940_010 Hb_000820_050 Hb_000820_050 Hb_105328_010--Hb_000820_050 Hb_000703_280 Hb_000703_280 Hb_105328_010--Hb_000703_280 Hb_006472_080 Hb_006472_080 Hb_105328_010--Hb_006472_080 Hb_000340_220 Hb_000340_220 Hb_000804_020--Hb_000340_220 Hb_007416_110 Hb_007416_110 Hb_000804_020--Hb_007416_110 Hb_000804_020--Hb_003025_030 Hb_001564_070 Hb_001564_070 Hb_000804_020--Hb_001564_070 Hb_000465_150 Hb_000465_150 Hb_000804_020--Hb_000465_150 Hb_009296_020 Hb_009296_020 Hb_000804_020--Hb_009296_020 Hb_001147_050 Hb_001147_050 Hb_083940_010--Hb_001147_050 Hb_000193_260 Hb_000193_260 Hb_083940_010--Hb_000193_260 Hb_000189_170 Hb_000189_170 Hb_083940_010--Hb_000189_170 Hb_002534_130 Hb_002534_130 Hb_083940_010--Hb_002534_130 Hb_005214_170 Hb_005214_170 Hb_083940_010--Hb_005214_170 Hb_001221_330 Hb_001221_330 Hb_083940_010--Hb_001221_330 Hb_003025_030--Hb_000465_150 Hb_124315_010 Hb_124315_010 Hb_003025_030--Hb_124315_010 Hb_002281_020 Hb_002281_020 Hb_003025_030--Hb_002281_020 Hb_003025_030--Hb_001564_070 Hb_003025_030--Hb_007416_110 Hb_001195_220 Hb_001195_220 Hb_003659_010--Hb_001195_220 Hb_007576_140 Hb_007576_140 Hb_003659_010--Hb_007576_140 Hb_002701_160 Hb_002701_160 Hb_003659_010--Hb_002701_160 Hb_001240_050 Hb_001240_050 Hb_003659_010--Hb_001240_050 Hb_000679_110 Hb_000679_110 Hb_003659_010--Hb_000679_110 Hb_002235_050 Hb_002235_050 Hb_003659_010--Hb_002235_050 Hb_003299_020 Hb_003299_020 Hb_005545_020--Hb_003299_020 Hb_000042_380 Hb_000042_380 Hb_005545_020--Hb_000042_380 Hb_000753_110 Hb_000753_110 Hb_005545_020--Hb_000753_110 Hb_001754_050 Hb_001754_050 Hb_005545_020--Hb_001754_050 Hb_004883_020 Hb_004883_020 Hb_005545_020--Hb_004883_020 Hb_007575_030 Hb_007575_030 Hb_005545_020--Hb_007575_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.274135 1.1298 3.605 1.5746 0.0925083 0.102103
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.361522 0.284499 2.38863 3.58476 1.72054

CAGE analysis