Hb_000032_450

Information

Type -
Description -
Location Contig32: 350984-353277
Sequence    

Annotation

kegg
ID rcu:RCOM_1692310
description zinc finger protein, putative
nr
ID XP_012087189.1
description PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]
swissprot
ID Q9SF78
description GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1
trembl
ID A0A067JR60
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20439 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase at1g71691

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33746: 351912-352163
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_450 0.0 - - PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]
2 Hb_105328_010 0.1352009351 - - PREDICTED: low-temperature-induced cysteine proteinase-like [Jatropha curcas]
3 Hb_000115_010 0.1815819059 - - 5-methyltetrahydrofolate:homocysteine methyltransferase, putative [Ricinus communis]
4 Hb_003878_050 0.1845680674 - - PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
5 Hb_000703_280 0.1996698755 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
6 Hb_007534_060 0.1998080485 - - protein binding protein, putative [Ricinus communis]
7 Hb_026889_040 0.2027171789 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
8 Hb_003044_080 0.2059636886 desease resistance Gene Name: Synthase_beta RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor [Hevea brasiliensis]
9 Hb_000849_120 0.2071387757 - - PREDICTED: linoleate 9S-lipoxygenase 6-like [Jatropha curcas]
10 Hb_000820_050 0.208810789 - - hypothetical protein EUGRSUZ_H02626 [Eucalyptus grandis]
11 Hb_001481_130 0.2107903319 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004088_040 0.2132494736 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Jatropha curcas]
13 Hb_011139_040 0.2142937668 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X2 [Jatropha curcas]
14 Hb_000181_460 0.2145969055 - - cmp-2-keto-3-deoctulosonate (cmp-kdo) cytidyltransferase, putative [Ricinus communis]
15 Hb_011861_100 0.2151992548 - - amino acid transporter, putative [Ricinus communis]
16 Hb_007262_030 0.2178285555 - - -
17 Hb_009252_020 0.2206659533 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
18 Hb_000215_280 0.2208331627 - - Protein-tyrosine phosphatase mitochondrial 1, mitochondrial precursor, putative [Ricinus communis]
19 Hb_000477_040 0.2217674997 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000189_410 0.2218263966 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000032_450 Hb_000032_450 Hb_105328_010 Hb_105328_010 Hb_000032_450--Hb_105328_010 Hb_000115_010 Hb_000115_010 Hb_000032_450--Hb_000115_010 Hb_003878_050 Hb_003878_050 Hb_000032_450--Hb_003878_050 Hb_000703_280 Hb_000703_280 Hb_000032_450--Hb_000703_280 Hb_007534_060 Hb_007534_060 Hb_000032_450--Hb_007534_060 Hb_026889_040 Hb_026889_040 Hb_000032_450--Hb_026889_040 Hb_001085_150 Hb_001085_150 Hb_105328_010--Hb_001085_150 Hb_083940_010 Hb_083940_010 Hb_105328_010--Hb_083940_010 Hb_000820_050 Hb_000820_050 Hb_105328_010--Hb_000820_050 Hb_105328_010--Hb_000703_280 Hb_006472_080 Hb_006472_080 Hb_105328_010--Hb_006472_080 Hb_000115_010--Hb_000820_050 Hb_000820_060 Hb_000820_060 Hb_000115_010--Hb_000820_060 Hb_000173_440 Hb_000173_440 Hb_000115_010--Hb_000173_440 Hb_006268_020 Hb_006268_020 Hb_000115_010--Hb_006268_020 Hb_001006_220 Hb_001006_220 Hb_000115_010--Hb_001006_220 Hb_003878_050--Hb_026889_040 Hb_000477_040 Hb_000477_040 Hb_003878_050--Hb_000477_040 Hb_003878_050--Hb_000703_280 Hb_004158_020 Hb_004158_020 Hb_003878_050--Hb_004158_020 Hb_001369_630 Hb_001369_630 Hb_003878_050--Hb_001369_630 Hb_000935_040 Hb_000935_040 Hb_003878_050--Hb_000935_040 Hb_000103_250 Hb_000103_250 Hb_000703_280--Hb_000103_250 Hb_000012_080 Hb_000012_080 Hb_000703_280--Hb_000012_080 Hb_021943_090 Hb_021943_090 Hb_000703_280--Hb_021943_090 Hb_001904_050 Hb_001904_050 Hb_000703_280--Hb_001904_050 Hb_000703_280--Hb_026889_040 Hb_000244_170 Hb_000244_170 Hb_000703_280--Hb_000244_170 Hb_001488_190 Hb_001488_190 Hb_007534_060--Hb_001488_190 Hb_000077_360 Hb_000077_360 Hb_007534_060--Hb_000077_360 Hb_069355_010 Hb_069355_010 Hb_007534_060--Hb_069355_010 Hb_001289_020 Hb_001289_020 Hb_007534_060--Hb_001289_020 Hb_007534_060--Hb_000477_040 Hb_000019_180 Hb_000019_180 Hb_026889_040--Hb_000019_180 Hb_026889_040--Hb_004158_020 Hb_091349_010 Hb_091349_010 Hb_026889_040--Hb_091349_010 Hb_011861_100 Hb_011861_100 Hb_026889_040--Hb_011861_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.311753 0.510358 1.12522 2.27576 0.102306 0.181782
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.101644 0.213235 2.24716 0.969164 1.16741

CAGE analysis