Hb_000703_280

Information

Type -
Description -
Location Contig703: 281044-286444
Sequence    

Annotation

kegg
ID rcu:RCOM_1466650
description o-linked n-acetylglucosamine transferase, ogt, putative
nr
ID XP_002514581.1
description o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
swissprot
ID Q9ULT0
description Tetratricopeptide repeat protein 7A OS=Homo sapiens GN=TTC7A PE=1 SV=3
trembl
ID B9RLG2
description O-linked n-acetylglucosamine transferase, ogt, putative OS=Ricinus communis GN=RCOM_1466650 PE=4 SV=1
Gene Ontology
ID GO:0005516
description tetratricopeptide repeat protein 7b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000703_280 0.0 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
2 Hb_000103_250 0.1271063183 transcription factor TF Family: Tify PREDICTED: protein TIFY 4B isoform X3 [Jatropha curcas]
3 Hb_000012_080 0.1332747777 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
4 Hb_021943_090 0.1425741959 - - PREDICTED: probable methylenetetrahydrofolate reductase [Jatropha curcas]
5 Hb_001904_050 0.1438699276 - - alpha-tubulin 1 [Hevea brasiliensis]
6 Hb_026889_040 0.1448950406 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
7 Hb_000244_170 0.1510115307 - - PREDICTED: proline-rich receptor-like protein kinase PERK2 [Jatropha curcas]
8 Hb_000742_020 0.1520413153 - - ARF GTPase activator, putative [Ricinus communis]
9 Hb_001663_040 0.1542558014 - - hypothetical protein B456_007G162000 [Gossypium raimondii]
10 Hb_006711_090 0.1554380304 - - PREDICTED: fatty acid 2-hydroxylase 1-like [Jatropha curcas]
11 Hb_000765_060 0.1558229289 - - Alcohol dehydrogenase-like 6 [Glycine soja]
12 Hb_003244_020 0.1561470082 - - PREDICTED: serine carboxypeptidase-like 27 [Jatropha curcas]
13 Hb_002174_040 0.1584970908 - - DNAJ heat shock family protein [Theobroma cacao]
14 Hb_003878_050 0.161631428 - - PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
15 Hb_000935_040 0.1624705436 - - Uncharacterized protein isoform 2 [Theobroma cacao]
16 Hb_000181_350 0.1638391415 - - PREDICTED: uncharacterized protein LOC105111090 [Populus euphratica]
17 Hb_006829_060 0.1654864679 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 isoform X1 [Jatropha curcas]
18 Hb_004158_020 0.1662954235 - - Rab1 [Hevea brasiliensis]
19 Hb_004088_040 0.1666503813 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Jatropha curcas]
20 Hb_004223_140 0.1678802124 - - endo-1,4-beta-glucanase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000703_280 Hb_000703_280 Hb_000103_250 Hb_000103_250 Hb_000703_280--Hb_000103_250 Hb_000012_080 Hb_000012_080 Hb_000703_280--Hb_000012_080 Hb_021943_090 Hb_021943_090 Hb_000703_280--Hb_021943_090 Hb_001904_050 Hb_001904_050 Hb_000703_280--Hb_001904_050 Hb_026889_040 Hb_026889_040 Hb_000703_280--Hb_026889_040 Hb_000244_170 Hb_000244_170 Hb_000703_280--Hb_000244_170 Hb_000066_030 Hb_000066_030 Hb_000103_250--Hb_000066_030 Hb_005218_020 Hb_005218_020 Hb_000103_250--Hb_005218_020 Hb_000742_020 Hb_000742_020 Hb_000103_250--Hb_000742_020 Hb_000889_100 Hb_000889_100 Hb_000103_250--Hb_000889_100 Hb_000665_180 Hb_000665_180 Hb_000103_250--Hb_000665_180 Hb_006829_060 Hb_006829_060 Hb_000012_080--Hb_006829_060 Hb_000057_110 Hb_000057_110 Hb_000012_080--Hb_000057_110 Hb_001188_100 Hb_001188_100 Hb_000012_080--Hb_001188_100 Hb_005074_040 Hb_005074_040 Hb_000012_080--Hb_005074_040 Hb_000012_080--Hb_000665_180 Hb_000395_110 Hb_000395_110 Hb_000012_080--Hb_000395_110 Hb_003994_030 Hb_003994_030 Hb_021943_090--Hb_003994_030 Hb_000979_130 Hb_000979_130 Hb_021943_090--Hb_000979_130 Hb_000367_180 Hb_000367_180 Hb_021943_090--Hb_000367_180 Hb_000260_510 Hb_000260_510 Hb_021943_090--Hb_000260_510 Hb_000800_090 Hb_000800_090 Hb_021943_090--Hb_000800_090 Hb_021943_090--Hb_000665_180 Hb_031527_110 Hb_031527_110 Hb_001904_050--Hb_031527_110 Hb_006711_090 Hb_006711_090 Hb_001904_050--Hb_006711_090 Hb_001904_050--Hb_000742_020 Hb_154038_020 Hb_154038_020 Hb_001904_050--Hb_154038_020 Hb_007441_080 Hb_007441_080 Hb_001904_050--Hb_007441_080 Hb_000181_350 Hb_000181_350 Hb_001904_050--Hb_000181_350 Hb_003878_050 Hb_003878_050 Hb_026889_040--Hb_003878_050 Hb_000019_180 Hb_000019_180 Hb_026889_040--Hb_000019_180 Hb_004158_020 Hb_004158_020 Hb_026889_040--Hb_004158_020 Hb_091349_010 Hb_091349_010 Hb_026889_040--Hb_091349_010 Hb_011861_100 Hb_011861_100 Hb_026889_040--Hb_011861_100 Hb_003244_020 Hb_003244_020 Hb_000244_170--Hb_003244_020 Hb_000062_330 Hb_000062_330 Hb_000244_170--Hb_000062_330 Hb_013394_050 Hb_013394_050 Hb_000244_170--Hb_013394_050 Hb_007894_010 Hb_007894_010 Hb_000244_170--Hb_007894_010 Hb_002184_090 Hb_002184_090 Hb_000244_170--Hb_002184_090 Hb_000197_020 Hb_000197_020 Hb_000244_170--Hb_000197_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.14583 0.072595 0.968275 1.71035 0.197656 0.272458
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.166509 0.376675 0.933453 0.475319 0.763016

CAGE analysis