Hb_000979_130

Information

Type -
Description -
Location Contig979: 149532-157662
Sequence    

Annotation

kegg
ID rcu:RCOM_0628900
description phosphoglucomutase, putative (EC:5.4.2.2)
nr
ID XP_012072267.1
description PREDICTED: phosphoglucomutase, cytoplasmic [Jatropha curcas]
swissprot
ID Q9ZSQ4
description Phosphoglucomutase, cytoplasmic OS=Populus tremula GN=PGM1 PE=2 SV=1
trembl
ID A0A067KSX1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04731 PE=3 SV=1
Gene Ontology
ID GO:0005737
description cytoplasmic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64299: 149563-157634
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000979_130 0.0 - - PREDICTED: phosphoglucomutase, cytoplasmic [Jatropha curcas]
2 Hb_005694_060 0.0659486831 - - PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase [Jatropha curcas]
3 Hb_000260_510 0.0665524899 - - PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Jatropha curcas]
4 Hb_000367_180 0.0675458558 - - Heparanase-2, putative [Ricinus communis]
5 Hb_015884_020 0.0687502311 - - PREDICTED: protein PIR [Jatropha curcas]
6 Hb_019654_020 0.0717989159 - - PREDICTED: T-complex protein 1 subunit beta [Jatropha curcas]
7 Hb_000395_110 0.0776385321 - - PREDICTED: molybdate-anion transporter [Jatropha curcas]
8 Hb_065968_010 0.0793969143 - - PREDICTED: probable glycosyltransferase At3g07620 isoform X2 [Jatropha curcas]
9 Hb_074197_040 0.0799230257 - - PREDICTED: SNARE-interacting protein KEULE [Jatropha curcas]
10 Hb_006829_060 0.0799726385 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 isoform X1 [Jatropha curcas]
11 Hb_000585_110 0.0816740267 - - PREDICTED: probable protein phosphatase 2C 66 [Jatropha curcas]
12 Hb_116349_120 0.0843632191 rubber biosynthesis Gene Name: Pyruvate dehydrogenase PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial isoform X1 [Jatropha curcas]
13 Hb_000510_170 0.0849505549 - - Glycosyltransferase QUASIMODO1, putative [Ricinus communis]
14 Hb_001117_110 0.0861078845 - - PREDICTED: dynamin-2A [Jatropha curcas]
15 Hb_000417_390 0.0889430866 - - PREDICTED: ER lumen protein-retaining receptor A [Jatropha curcas]
16 Hb_002552_040 0.0899203859 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
17 Hb_021943_090 0.0906705119 - - PREDICTED: probable methylenetetrahydrofolate reductase [Jatropha curcas]
18 Hb_006970_020 0.0918283319 - - PREDICTED: DNA topoisomerase 6 subunit B [Jatropha curcas]
19 Hb_000007_060 0.0924924556 - - PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 1-like isoform X1 [Jatropha curcas]
20 Hb_000638_130 0.0935556137 - - PREDICTED: SAL1 phosphatase-like [Jatropha curcas]

Gene co-expression network

sample Hb_000979_130 Hb_000979_130 Hb_005694_060 Hb_005694_060 Hb_000979_130--Hb_005694_060 Hb_000260_510 Hb_000260_510 Hb_000979_130--Hb_000260_510 Hb_000367_180 Hb_000367_180 Hb_000979_130--Hb_000367_180 Hb_015884_020 Hb_015884_020 Hb_000979_130--Hb_015884_020 Hb_019654_020 Hb_019654_020 Hb_000979_130--Hb_019654_020 Hb_000395_110 Hb_000395_110 Hb_000979_130--Hb_000395_110 Hb_005694_060--Hb_015884_020 Hb_001117_110 Hb_001117_110 Hb_005694_060--Hb_001117_110 Hb_000585_110 Hb_000585_110 Hb_005694_060--Hb_000585_110 Hb_030736_040 Hb_030736_040 Hb_005694_060--Hb_030736_040 Hb_116349_120 Hb_116349_120 Hb_005694_060--Hb_116349_120 Hb_000260_510--Hb_000395_110 Hb_010672_020 Hb_010672_020 Hb_000260_510--Hb_010672_020 Hb_000260_510--Hb_000367_180 Hb_000007_060 Hb_000007_060 Hb_000260_510--Hb_000007_060 Hb_001507_120 Hb_001507_120 Hb_000260_510--Hb_001507_120 Hb_000367_180--Hb_019654_020 Hb_000367_180--Hb_000007_060 Hb_065968_010 Hb_065968_010 Hb_000367_180--Hb_065968_010 Hb_000367_180--Hb_015884_020 Hb_015884_020--Hb_001117_110 Hb_015884_020--Hb_019654_020 Hb_006970_020 Hb_006970_020 Hb_015884_020--Hb_006970_020 Hb_002687_200 Hb_002687_200 Hb_015884_020--Hb_002687_200 Hb_019654_020--Hb_000007_060 Hb_019654_020--Hb_000585_110 Hb_003058_100 Hb_003058_100 Hb_019654_020--Hb_003058_100 Hb_000395_110--Hb_010672_020 Hb_185830_060 Hb_185830_060 Hb_000395_110--Hb_185830_060 Hb_000665_180 Hb_000665_180 Hb_000395_110--Hb_000665_180 Hb_002193_060 Hb_002193_060 Hb_000395_110--Hb_002193_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.782 34.0752 79.2019 106.438 22.7725 23.4495
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.4957 24.6723 49.9508 65.0061 92.8827

CAGE analysis