Hb_000057_110

Information

Type -
Description -
Location Contig57: 179099-184941
Sequence    

Annotation

kegg
ID rcu:RCOM_1494510
description kif4, putative
nr
ID XP_012073348.1
description PREDICTED: kinesin-13A [Jatropha curcas]
swissprot
ID Q940B8
description Kinesin-13A OS=Arabidopsis thaliana GN=KINESIN-13A PE=1 SV=1
trembl
ID A0A067KQJ9
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_06284 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin motor family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49298: 179101-184984
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000057_110 0.0 - - PREDICTED: kinesin-13A [Jatropha curcas]
2 Hb_000684_030 0.076094111 - - syntaxin, putative [Ricinus communis]
3 Hb_000200_300 0.0791477545 - - PREDICTED: uncharacterized protein LOC105636926 [Jatropha curcas]
4 Hb_000364_170 0.0805558137 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase CLF [Jatropha curcas]
5 Hb_000012_080 0.0864153282 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
6 Hb_006829_060 0.0888602096 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 isoform X1 [Jatropha curcas]
7 Hb_008725_270 0.0905463637 - - PREDICTED: probable protein disulfide-isomerase A6 [Jatropha curcas]
8 Hb_000007_090 0.090976244 - - PREDICTED: LAG1 longevity assurance homolog 3 [Jatropha curcas]
9 Hb_002193_060 0.092501176 - - PREDICTED: uncharacterized protein C4orf29 homolog [Pyrus x bretschneideri]
10 Hb_000181_350 0.0942248556 - - PREDICTED: uncharacterized protein LOC105111090 [Populus euphratica]
11 Hb_011486_060 0.0973612423 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000665_180 0.0986943758 - - PREDICTED: ER membrane protein complex subunit 7 homolog isoform X2 [Jatropha curcas]
13 Hb_000638_070 0.1009190327 - - PREDICTED: protein trichome birefringence-like 14 [Jatropha curcas]
14 Hb_003605_020 0.1023743821 - - exocyst complex component sec6, putative [Ricinus communis]
15 Hb_000049_180 0.1024521314 - - aromatic amino acid decarboxylase, putative [Ricinus communis]
16 Hb_000072_300 0.1040204914 - - PREDICTED: probable galacturonosyltransferase 9 [Jatropha curcas]
17 Hb_027506_040 0.1043604477 rubber biosynthesis Gene Name: Pyruvate dehydrogenase PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic [Jatropha curcas]
18 Hb_005754_040 0.1046712019 - - PREDICTED: uncharacterized protein LOC105636678 isoform X2 [Jatropha curcas]
19 Hb_003058_100 0.1053078533 - - PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial [Jatropha curcas]
20 Hb_000395_280 0.1057517943 - - PREDICTED: thioredoxin-related transmembrane protein 2 [Vitis vinifera]

Gene co-expression network

sample Hb_000057_110 Hb_000057_110 Hb_000684_030 Hb_000684_030 Hb_000057_110--Hb_000684_030 Hb_000200_300 Hb_000200_300 Hb_000057_110--Hb_000200_300 Hb_000364_170 Hb_000364_170 Hb_000057_110--Hb_000364_170 Hb_000012_080 Hb_000012_080 Hb_000057_110--Hb_000012_080 Hb_006829_060 Hb_006829_060 Hb_000057_110--Hb_006829_060 Hb_008725_270 Hb_008725_270 Hb_000057_110--Hb_008725_270 Hb_001221_030 Hb_001221_030 Hb_000684_030--Hb_001221_030 Hb_000174_260 Hb_000174_260 Hb_000684_030--Hb_000174_260 Hb_003266_030 Hb_003266_030 Hb_000684_030--Hb_003266_030 Hb_000684_030--Hb_000200_300 Hb_003605_020 Hb_003605_020 Hb_000684_030--Hb_003605_020 Hb_000926_080 Hb_000926_080 Hb_000200_300--Hb_000926_080 Hb_000200_300--Hb_003266_030 Hb_004965_110 Hb_004965_110 Hb_000200_300--Hb_004965_110 Hb_000086_080 Hb_000086_080 Hb_000200_300--Hb_000086_080 Hb_011381_040 Hb_011381_040 Hb_000364_170--Hb_011381_040 Hb_000364_170--Hb_000200_300 Hb_006775_120 Hb_006775_120 Hb_000364_170--Hb_006775_120 Hb_002783_220 Hb_002783_220 Hb_000364_170--Hb_002783_220 Hb_005754_040 Hb_005754_040 Hb_000364_170--Hb_005754_040 Hb_000012_080--Hb_006829_060 Hb_001188_100 Hb_001188_100 Hb_000012_080--Hb_001188_100 Hb_005074_040 Hb_005074_040 Hb_000012_080--Hb_005074_040 Hb_000665_180 Hb_000665_180 Hb_000012_080--Hb_000665_180 Hb_000395_110 Hb_000395_110 Hb_000012_080--Hb_000395_110 Hb_000979_130 Hb_000979_130 Hb_006829_060--Hb_000979_130 Hb_001976_030 Hb_001976_030 Hb_006829_060--Hb_001976_030 Hb_002687_160 Hb_002687_160 Hb_006829_060--Hb_002687_160 Hb_019654_020 Hb_019654_020 Hb_006829_060--Hb_019654_020 Hb_003680_220 Hb_003680_220 Hb_008725_270--Hb_003680_220 Hb_000007_090 Hb_000007_090 Hb_008725_270--Hb_000007_090 Hb_003929_180 Hb_003929_180 Hb_008725_270--Hb_003929_180 Hb_002687_200 Hb_002687_200 Hb_008725_270--Hb_002687_200 Hb_000926_060 Hb_000926_060 Hb_008725_270--Hb_000926_060 Hb_000500_220 Hb_000500_220 Hb_008725_270--Hb_000500_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.00806 3.2483 20.557 19.3919 3.33644 4.30351
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.8351 6.94173 6.29581 7.9071 14.7047

CAGE analysis