Hb_002783_220

Information

Type -
Description -
Location Contig2783: 204614-207028
Sequence    

Annotation

kegg
ID rcu:RCOM_1597990
description hypothetical protein
nr
ID XP_012073797.1
description PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KLB3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08213 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29056: 205531-206960
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002783_220 0.0 - - PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]
2 Hb_006775_120 0.1022304062 - - exonuclease-like protein [Oryza sativa Japonica Group]
3 Hb_000364_170 0.103151895 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase CLF [Jatropha curcas]
4 Hb_000000_330 0.1078960579 - - PREDICTED: uncharacterized protein LOC105633747 [Jatropha curcas]
5 Hb_005333_060 0.1112489684 - - PREDICTED: uncharacterized protein LOC105630688 [Jatropha curcas]
6 Hb_019654_050 0.1122780061 - - PREDICTED: prolyl endopeptidase [Jatropha curcas]
7 Hb_000987_040 0.1147220529 - - PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X2 [Jatropha curcas]
8 Hb_000103_120 0.1154117627 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X2 [Jatropha curcas]
9 Hb_011381_040 0.1156827092 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic [Jatropha curcas]
10 Hb_004013_030 0.1156857188 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
11 Hb_000072_300 0.1174747961 - - PREDICTED: probable galacturonosyltransferase 9 [Jatropha curcas]
12 Hb_004125_010 0.1201347067 - - PREDICTED: uncharacterized protein LOC105632163 [Jatropha curcas]
13 Hb_004228_120 0.1210036459 - - hypothetical protein POPTR_0013s02080g [Populus trichocarpa]
14 Hb_002676_120 0.1215425318 - - hypothetical protein POPTR_0002s23750g [Populus trichocarpa]
15 Hb_010381_010 0.1216421983 - - WD-repeat protein, putative [Ricinus communis]
16 Hb_074399_010 0.1217164833 - - PREDICTED: phragmoplast orienting kinesin-1 isoform X1 [Populus euphratica]
17 Hb_000035_080 0.1217480872 - - PREDICTED: U-box domain-containing protein 12-like [Jatropha curcas]
18 Hb_004221_030 0.122431726 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X1 [Jatropha curcas]
19 Hb_000331_140 0.122553905 - - PREDICTED: cycloeucalenol cycloisomerase [Jatropha curcas]
20 Hb_001102_070 0.1245821445 transcription factor TF Family: STAT conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002783_220 Hb_002783_220 Hb_006775_120 Hb_006775_120 Hb_002783_220--Hb_006775_120 Hb_000364_170 Hb_000364_170 Hb_002783_220--Hb_000364_170 Hb_000000_330 Hb_000000_330 Hb_002783_220--Hb_000000_330 Hb_005333_060 Hb_005333_060 Hb_002783_220--Hb_005333_060 Hb_019654_050 Hb_019654_050 Hb_002783_220--Hb_019654_050 Hb_000987_040 Hb_000987_040 Hb_002783_220--Hb_000987_040 Hb_006775_120--Hb_000000_330 Hb_000926_060 Hb_000926_060 Hb_006775_120--Hb_000926_060 Hb_005754_040 Hb_005754_040 Hb_006775_120--Hb_005754_040 Hb_006775_120--Hb_000364_170 Hb_000395_280 Hb_000395_280 Hb_006775_120--Hb_000395_280 Hb_011381_040 Hb_011381_040 Hb_000364_170--Hb_011381_040 Hb_000057_110 Hb_000057_110 Hb_000364_170--Hb_000057_110 Hb_000200_300 Hb_000200_300 Hb_000364_170--Hb_000200_300 Hb_000364_170--Hb_005754_040 Hb_074399_010 Hb_074399_010 Hb_000000_330--Hb_074399_010 Hb_164010_050 Hb_164010_050 Hb_000000_330--Hb_164010_050 Hb_000003_030 Hb_000003_030 Hb_000000_330--Hb_000003_030 Hb_003540_050 Hb_003540_050 Hb_000000_330--Hb_003540_050 Hb_005333_060--Hb_000987_040 Hb_002676_120 Hb_002676_120 Hb_005333_060--Hb_002676_120 Hb_000739_240 Hb_000739_240 Hb_005333_060--Hb_000739_240 Hb_094121_010 Hb_094121_010 Hb_005333_060--Hb_094121_010 Hb_005333_060--Hb_006775_120 Hb_001799_160 Hb_001799_160 Hb_019654_050--Hb_001799_160 Hb_000120_890 Hb_000120_890 Hb_019654_050--Hb_000120_890 Hb_003835_110 Hb_003835_110 Hb_019654_050--Hb_003835_110 Hb_003498_100 Hb_003498_100 Hb_019654_050--Hb_003498_100 Hb_019654_050--Hb_011381_040 Hb_000987_040--Hb_002676_120 Hb_000987_040--Hb_005754_040 Hb_001633_200 Hb_001633_200 Hb_000987_040--Hb_001633_200 Hb_004125_010 Hb_004125_010 Hb_000987_040--Hb_004125_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.22039 0.9755 6.6555 4.00976 1.33871 1.81012
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.923943 1.24164 1.86317 1.9516 1.88471

CAGE analysis