Hb_000739_240

Information

Type -
Description -
Location Contig739: 212748-220400
Sequence    

Annotation

kegg
ID rcu:RCOM_1612350
description Kinesin-II 85 kDa subunit, putative
nr
ID XP_012083554.1
description PREDICTED: armadillo repeat-containing kinesin-like protein 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9LPC6
description Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2
trembl
ID A0A067KAC4
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_14510 PE=3 SV=1
Gene Ontology
ID GO:0005871
description armadillo repeat kinesin 2 isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56297: 212805-220275
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000739_240 0.0 - - PREDICTED: armadillo repeat-containing kinesin-like protein 2 isoform X1 [Jatropha curcas]
2 Hb_000579_080 0.0802678885 - - PREDICTED: 26S protease regulatory subunit S10B homolog B [Jatropha curcas]
3 Hb_008206_080 0.0833567419 - - PREDICTED: probable cyclic nucleotide-gated ion channel 17 [Jatropha curcas]
4 Hb_159809_070 0.0903501377 - - phospholipase A-2-activating protein, putative [Ricinus communis]
5 Hb_000229_050 0.0904317497 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3-like [Jatropha curcas]
6 Hb_004228_120 0.0905338947 - - hypothetical protein POPTR_0013s02080g [Populus trichocarpa]
7 Hb_000724_020 0.0911170703 transcription factor TF Family: PHD PREDICTED: probable Histone-lysine N-methyltransferase ATXR5 [Jatropha curcas]
8 Hb_001053_190 0.091866903 - - ADP,ATP carrier protein, putative [Ricinus communis]
9 Hb_005649_100 0.0927570569 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
10 Hb_002326_110 0.0960443904 - - PREDICTED: uncharacterized protein LOC103320920 [Prunus mume]
11 Hb_004100_050 0.096808006 - - PREDICTED: mitochondrial-processing peptidase subunit alpha-like [Jatropha curcas]
12 Hb_002686_080 0.0968146718 transcription factor TF Family: PHD PREDICTED: PHD finger protein ING2-like [Jatropha curcas]
13 Hb_025668_010 0.1007336199 - - unnamed protein product [Coffea canephora]
14 Hb_002684_020 0.1009572858 - - ATP-dependent clp protease ATP-binding subunit clpx, putative [Ricinus communis]
15 Hb_005333_060 0.1013104738 - - PREDICTED: uncharacterized protein LOC105630688 [Jatropha curcas]
16 Hb_001102_070 0.1020363378 transcription factor TF Family: STAT conserved hypothetical protein [Ricinus communis]
17 Hb_004096_060 0.1023906677 - - PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Jatropha curcas]
18 Hb_000880_070 0.1030285405 - - gamma-tubulin complex component, putative [Ricinus communis]
19 Hb_002687_180 0.1045367051 - - PREDICTED: phytochrome-associated serine/threonine-protein phosphatase [Jatropha curcas]
20 Hb_016347_020 0.1046594472 - - PREDICTED: D-amino-acid transaminase, chloroplastic-like isoform X1 [Populus euphratica]

Gene co-expression network

sample Hb_000739_240 Hb_000739_240 Hb_000579_080 Hb_000579_080 Hb_000739_240--Hb_000579_080 Hb_008206_080 Hb_008206_080 Hb_000739_240--Hb_008206_080 Hb_159809_070 Hb_159809_070 Hb_000739_240--Hb_159809_070 Hb_000229_050 Hb_000229_050 Hb_000739_240--Hb_000229_050 Hb_004228_120 Hb_004228_120 Hb_000739_240--Hb_004228_120 Hb_000724_020 Hb_000724_020 Hb_000739_240--Hb_000724_020 Hb_000926_060 Hb_000926_060 Hb_000579_080--Hb_000926_060 Hb_001504_010 Hb_001504_010 Hb_000579_080--Hb_001504_010 Hb_012633_050 Hb_012633_050 Hb_000579_080--Hb_012633_050 Hb_000579_080--Hb_000229_050 Hb_000579_080--Hb_008206_080 Hb_008304_020 Hb_008304_020 Hb_000579_080--Hb_008304_020 Hb_008206_080--Hb_000229_050 Hb_008206_080--Hb_012633_050 Hb_008206_080--Hb_159809_070 Hb_008206_080--Hb_008304_020 Hb_000101_390 Hb_000101_390 Hb_008206_080--Hb_000101_390 Hb_001227_120 Hb_001227_120 Hb_159809_070--Hb_001227_120 Hb_000078_140 Hb_000078_140 Hb_159809_070--Hb_000078_140 Hb_079526_040 Hb_079526_040 Hb_159809_070--Hb_079526_040 Hb_065968_010 Hb_065968_010 Hb_159809_070--Hb_065968_010 Hb_006189_020 Hb_006189_020 Hb_159809_070--Hb_006189_020 Hb_159809_070--Hb_008304_020 Hb_000229_050--Hb_012633_050 Hb_011716_010 Hb_011716_010 Hb_000229_050--Hb_011716_010 Hb_000229_050--Hb_000101_390 Hb_001279_190 Hb_001279_190 Hb_004228_120--Hb_001279_190 Hb_002687_180 Hb_002687_180 Hb_004228_120--Hb_002687_180 Hb_002552_040 Hb_002552_040 Hb_004228_120--Hb_002552_040 Hb_004228_120--Hb_159809_070 Hb_004228_120--Hb_001227_120 Hb_004228_120--Hb_011716_010 Hb_004032_370 Hb_004032_370 Hb_000724_020--Hb_004032_370 Hb_004109_120 Hb_004109_120 Hb_000724_020--Hb_004109_120 Hb_004096_060 Hb_004096_060 Hb_000724_020--Hb_004096_060 Hb_001053_190 Hb_001053_190 Hb_000724_020--Hb_001053_190 Hb_003228_100 Hb_003228_100 Hb_000724_020--Hb_003228_100 Hb_000724_020--Hb_000579_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.60938 4.19833 13.7807 8.78363 5.17956 3.36484
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.35902 2.99381 5.6229 8.27858 6.80792

CAGE analysis