Hb_094121_010

Information

Type -
Description -
Location Contig94121: 3190-4124
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094121_010 0.0 - - -
2 Hb_003430_050 0.1025773218 - - PREDICTED: serine/arginine-rich splicing factor RSZ21A isoform X1 [Phoenix dactylifera]
3 Hb_081599_010 0.1101510197 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001633_200 0.1115521775 - - hypothetical protein B456_005G137400 [Gossypium raimondii]
5 Hb_000072_300 0.1120472185 - - PREDICTED: probable galacturonosyltransferase 9 [Jatropha curcas]
6 Hb_067130_010 0.1121900898 - - protein binding protein, putative [Ricinus communis]
7 Hb_005333_060 0.1130277044 - - PREDICTED: uncharacterized protein LOC105630688 [Jatropha curcas]
8 Hb_089839_010 0.1150799441 - - PREDICTED: probable xyloglucan glycosyltransferase 6 [Jatropha curcas]
9 Hb_001227_120 0.1165696227 transcription factor TF Family: C2H2 Histone deacetylase 2a, putative [Ricinus communis]
10 Hb_053709_050 0.1179436941 - - PREDICTED: nudix hydrolase 23, chloroplastic isoform X2 [Jatropha curcas]
11 Hb_002686_080 0.1192821454 transcription factor TF Family: PHD PREDICTED: PHD finger protein ING2-like [Jatropha curcas]
12 Hb_000028_520 0.1198849838 - - hypothetical protein L484_025125 [Morus notabilis]
13 Hb_000069_640 0.1207789387 - - PREDICTED: tubulin gamma-1 chain [Vitis vinifera]
14 Hb_003098_070 0.1215277031 - - PREDICTED: uncharacterized protein LOC105633456 [Jatropha curcas]
15 Hb_002157_120 0.1216191696 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000019_190 0.1224404093 - - hypothetical protein POPTR_0002s23900g [Populus trichocarpa]
17 Hb_007831_010 0.1254781133 - - PREDICTED: oligoribonuclease [Vitis vinifera]
18 Hb_159809_070 0.125751579 - - phospholipase A-2-activating protein, putative [Ricinus communis]
19 Hb_154471_020 0.1261716747 - - squalene synthetase [Euphorbia tirucalli]
20 Hb_004097_130 0.1265049213 - - Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_094121_010 Hb_094121_010 Hb_003430_050 Hb_003430_050 Hb_094121_010--Hb_003430_050 Hb_081599_010 Hb_081599_010 Hb_094121_010--Hb_081599_010 Hb_001633_200 Hb_001633_200 Hb_094121_010--Hb_001633_200 Hb_000072_300 Hb_000072_300 Hb_094121_010--Hb_000072_300 Hb_067130_010 Hb_067130_010 Hb_094121_010--Hb_067130_010 Hb_005333_060 Hb_005333_060 Hb_094121_010--Hb_005333_060 Hb_007831_010 Hb_007831_010 Hb_003430_050--Hb_007831_010 Hb_003098_070 Hb_003098_070 Hb_003430_050--Hb_003098_070 Hb_000365_230 Hb_000365_230 Hb_003430_050--Hb_000365_230 Hb_163175_010 Hb_163175_010 Hb_003430_050--Hb_163175_010 Hb_003883_060 Hb_003883_060 Hb_003430_050--Hb_003883_060 Hb_007894_150 Hb_007894_150 Hb_003430_050--Hb_007894_150 Hb_002740_080 Hb_002740_080 Hb_081599_010--Hb_002740_080 Hb_001227_120 Hb_001227_120 Hb_081599_010--Hb_001227_120 Hb_000152_600 Hb_000152_600 Hb_081599_010--Hb_000152_600 Hb_003498_100 Hb_003498_100 Hb_081599_010--Hb_003498_100 Hb_001279_190 Hb_001279_190 Hb_081599_010--Hb_001279_190 Hb_001269_130 Hb_001269_130 Hb_081599_010--Hb_001269_130 Hb_001507_120 Hb_001507_120 Hb_001633_200--Hb_001507_120 Hb_000705_230 Hb_000705_230 Hb_001633_200--Hb_000705_230 Hb_000395_280 Hb_000395_280 Hb_001633_200--Hb_000395_280 Hb_000197_020 Hb_000197_020 Hb_001633_200--Hb_000197_020 Hb_010672_020 Hb_010672_020 Hb_001633_200--Hb_010672_020 Hb_003777_200 Hb_003777_200 Hb_001633_200--Hb_003777_200 Hb_003540_050 Hb_003540_050 Hb_000072_300--Hb_003540_050 Hb_000072_300--Hb_002740_080 Hb_000359_290 Hb_000359_290 Hb_000072_300--Hb_000359_290 Hb_002686_080 Hb_002686_080 Hb_000072_300--Hb_002686_080 Hb_005064_010 Hb_005064_010 Hb_000072_300--Hb_005064_010 Hb_000072_300--Hb_000152_600 Hb_000331_090 Hb_000331_090 Hb_067130_010--Hb_000331_090 Hb_000720_040 Hb_000720_040 Hb_067130_010--Hb_000720_040 Hb_011282_060 Hb_011282_060 Hb_067130_010--Hb_011282_060 Hb_000916_070 Hb_000916_070 Hb_067130_010--Hb_000916_070 Hb_052805_010 Hb_052805_010 Hb_067130_010--Hb_052805_010 Hb_000107_230 Hb_000107_230 Hb_067130_010--Hb_000107_230 Hb_000987_040 Hb_000987_040 Hb_005333_060--Hb_000987_040 Hb_002676_120 Hb_002676_120 Hb_005333_060--Hb_002676_120 Hb_000739_240 Hb_000739_240 Hb_005333_060--Hb_000739_240 Hb_002783_220 Hb_002783_220 Hb_005333_060--Hb_002783_220 Hb_006775_120 Hb_006775_120 Hb_005333_060--Hb_006775_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.518805 0.631197 1.72767 1.33827 0.250879 0.896184
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.484308 0.665924 0.815865 0.747297 0.721008

CAGE analysis