Hb_000364_170

Information

Type transcription factor
Description TF Family: SET
Location Contig364: 182637-192627
Sequence    

Annotation

kegg
ID pop:POPTR_0007s10830g
description POPTRDRAFT_719252; Polycomb group protein CURLY LEAF
nr
ID XP_012079259.1
description PREDICTED: histone-lysine N-methyltransferase CLF [Jatropha curcas]
swissprot
ID P93831
description Histone-lysine N-methyltransferase CLF OS=Arabidopsis thaliana GN=CLF PE=1 SV=2
trembl
ID A0A067KAC2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12419 PE=4 SV=1
Gene Ontology
ID GO:0031519
description polycomb group protein curly leaf

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37460: 182780-192793
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000364_170 0.0 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase CLF [Jatropha curcas]
2 Hb_011381_040 0.0792888798 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic [Jatropha curcas]
3 Hb_000057_110 0.0805558137 - - PREDICTED: kinesin-13A [Jatropha curcas]
4 Hb_000200_300 0.0914438933 - - PREDICTED: uncharacterized protein LOC105636926 [Jatropha curcas]
5 Hb_006775_120 0.0989397978 - - exonuclease-like protein [Oryza sativa Japonica Group]
6 Hb_002783_220 0.103151895 - - PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]
7 Hb_005754_040 0.103686273 - - PREDICTED: uncharacterized protein LOC105636678 isoform X2 [Jatropha curcas]
8 Hb_000072_300 0.1068491635 - - PREDICTED: probable galacturonosyltransferase 9 [Jatropha curcas]
9 Hb_000163_260 0.1111635378 - - PREDICTED: uncharacterized protein LOC105642518 [Jatropha curcas]
10 Hb_002205_140 0.1121316781 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b [Jatropha curcas]
11 Hb_006588_190 0.1128679387 - - PREDICTED: ataxin-3 homolog [Jatropha curcas]
12 Hb_000684_030 0.1134355417 - - syntaxin, putative [Ricinus communis]
13 Hb_003540_050 0.1147315424 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
14 Hb_000926_080 0.1152871959 - - PREDICTED: paraspeckle component 1 [Jatropha curcas]
15 Hb_000890_130 0.1158962381 - - PREDICTED: probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2 [Phoenix dactylifera]
16 Hb_000029_400 0.1163497057 - - PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 isoform X1 [Jatropha curcas]
17 Hb_001102_050 0.1174404118 - - PREDICTED: fatty-acid-binding protein 3 [Jatropha curcas]
18 Hb_000765_060 0.1178565193 - - Alcohol dehydrogenase-like 6 [Glycine soja]
19 Hb_000181_350 0.1179921316 - - PREDICTED: uncharacterized protein LOC105111090 [Populus euphratica]
20 Hb_001882_010 0.1188419501 - - -

Gene co-expression network

sample Hb_000364_170 Hb_000364_170 Hb_011381_040 Hb_011381_040 Hb_000364_170--Hb_011381_040 Hb_000057_110 Hb_000057_110 Hb_000364_170--Hb_000057_110 Hb_000200_300 Hb_000200_300 Hb_000364_170--Hb_000200_300 Hb_006775_120 Hb_006775_120 Hb_000364_170--Hb_006775_120 Hb_002783_220 Hb_002783_220 Hb_000364_170--Hb_002783_220 Hb_005754_040 Hb_005754_040 Hb_000364_170--Hb_005754_040 Hb_003835_110 Hb_003835_110 Hb_011381_040--Hb_003835_110 Hb_006588_190 Hb_006588_190 Hb_011381_040--Hb_006588_190 Hb_002871_040 Hb_002871_040 Hb_011381_040--Hb_002871_040 Hb_000029_400 Hb_000029_400 Hb_011381_040--Hb_000029_400 Hb_002027_320 Hb_002027_320 Hb_011381_040--Hb_002027_320 Hb_000684_030 Hb_000684_030 Hb_000057_110--Hb_000684_030 Hb_000057_110--Hb_000200_300 Hb_000012_080 Hb_000012_080 Hb_000057_110--Hb_000012_080 Hb_006829_060 Hb_006829_060 Hb_000057_110--Hb_006829_060 Hb_008725_270 Hb_008725_270 Hb_000057_110--Hb_008725_270 Hb_000926_080 Hb_000926_080 Hb_000200_300--Hb_000926_080 Hb_003266_030 Hb_003266_030 Hb_000200_300--Hb_003266_030 Hb_004965_110 Hb_004965_110 Hb_000200_300--Hb_004965_110 Hb_000200_300--Hb_000684_030 Hb_000086_080 Hb_000086_080 Hb_000200_300--Hb_000086_080 Hb_000000_330 Hb_000000_330 Hb_006775_120--Hb_000000_330 Hb_000926_060 Hb_000926_060 Hb_006775_120--Hb_000926_060 Hb_006775_120--Hb_005754_040 Hb_000395_280 Hb_000395_280 Hb_006775_120--Hb_000395_280 Hb_006775_120--Hb_002783_220 Hb_002783_220--Hb_000000_330 Hb_005333_060 Hb_005333_060 Hb_002783_220--Hb_005333_060 Hb_019654_050 Hb_019654_050 Hb_002783_220--Hb_019654_050 Hb_000987_040 Hb_000987_040 Hb_002783_220--Hb_000987_040 Hb_005754_040--Hb_000395_280 Hb_003605_020 Hb_003605_020 Hb_005754_040--Hb_003605_020 Hb_002676_120 Hb_002676_120 Hb_005754_040--Hb_002676_120 Hb_000072_300 Hb_000072_300 Hb_005754_040--Hb_000072_300 Hb_005754_040--Hb_000684_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.15207 0.710122 6.41954 4.17782 1.14914 1.21036
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.46881 1.85355 1.27662 1.93198 2.75916

CAGE analysis