Hb_008725_270

Information

Type -
Description -
Location Contig8725: 141405-144680
Sequence    

Annotation

kegg
ID rcu:RCOM_1347720
description protein disulfide isomerase, putative (EC:5.3.4.1)
nr
ID XP_012082863.1
description PREDICTED: probable protein disulfide-isomerase A6 [Jatropha curcas]
swissprot
ID P38661
description Probable protein disulfide-isomerase A6 OS=Medicago sativa PE=2 SV=1
trembl
ID A0A067JZP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14004 PE=3 SV=1
Gene Ontology
ID GO:0005783
description probable protein disulfide-isomerase a6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61209: 141425-144634 , PASA_asmbl_61210: 142938-143232
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008725_270 0.0 - - PREDICTED: probable protein disulfide-isomerase A6 [Jatropha curcas]
2 Hb_003680_220 0.0445905429 - - hypothetical protein B456_002G243700 [Gossypium raimondii]
3 Hb_000007_090 0.0761656897 - - PREDICTED: LAG1 longevity assurance homolog 3 [Jatropha curcas]
4 Hb_003929_180 0.0779977366 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 isoform X1 [Glycine max]
5 Hb_002687_200 0.0788391762 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000926_060 0.0803207862 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000500_220 0.0835516643 - - PREDICTED: intersectin-1 [Jatropha curcas]
8 Hb_019654_020 0.08572454 - - PREDICTED: T-complex protein 1 subunit beta [Jatropha curcas]
9 Hb_000375_300 0.0879920854 - - PREDICTED: cyanate hydratase [Jatropha curcas]
10 Hb_002627_040 0.08931484 - - prolyl 4-hydroxylase alpha subunit, putative [Ricinus communis]
11 Hb_002552_040 0.0895934646 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
12 Hb_000057_110 0.0905463637 - - PREDICTED: kinesin-13A [Jatropha curcas]
13 Hb_002942_230 0.0929584221 - - PREDICTED: long chain base biosynthesis protein 2a [Populus euphratica]
14 Hb_006829_060 0.0963486536 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 isoform X1 [Jatropha curcas]
15 Hb_006438_020 0.097166516 - - PREDICTED: lysine--tRNA ligase-like [Populus euphratica]
16 Hb_000012_080 0.0985309325 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
17 Hb_070624_010 0.0986610794 - - PREDICTED: reticulocalbin-2 [Jatropha curcas]
18 Hb_011716_010 0.0987908882 - - PREDICTED: probable protein arginine N-methyltransferase 1.2 [Jatropha curcas]
19 Hb_009296_020 0.0989479693 desease resistance Gene Name: ATP-synt_ab_N PREDICTED: ATP synthase subunit beta, mitochondrial-like [Jatropha curcas]
20 Hb_002740_080 0.0989847909 - - flap endonuclease-1, putative [Ricinus communis]

Gene co-expression network

sample Hb_008725_270 Hb_008725_270 Hb_003680_220 Hb_003680_220 Hb_008725_270--Hb_003680_220 Hb_000007_090 Hb_000007_090 Hb_008725_270--Hb_000007_090 Hb_003929_180 Hb_003929_180 Hb_008725_270--Hb_003929_180 Hb_002687_200 Hb_002687_200 Hb_008725_270--Hb_002687_200 Hb_000926_060 Hb_000926_060 Hb_008725_270--Hb_000926_060 Hb_000500_220 Hb_000500_220 Hb_008725_270--Hb_000500_220 Hb_003680_220--Hb_002687_200 Hb_003680_220--Hb_000926_060 Hb_003680_220--Hb_000500_220 Hb_009296_020 Hb_009296_020 Hb_003680_220--Hb_009296_020 Hb_003680_220--Hb_000007_090 Hb_000585_110 Hb_000585_110 Hb_000007_090--Hb_000585_110 Hb_000007_090--Hb_002687_200 Hb_002249_080 Hb_002249_080 Hb_000007_090--Hb_002249_080 Hb_019654_020 Hb_019654_020 Hb_000007_090--Hb_019654_020 Hb_004032_210 Hb_004032_210 Hb_003929_180--Hb_004032_210 Hb_004223_140 Hb_004223_140 Hb_003929_180--Hb_004223_140 Hb_004218_130 Hb_004218_130 Hb_003929_180--Hb_004218_130 Hb_000012_080 Hb_000012_080 Hb_003929_180--Hb_000012_080 Hb_006351_020 Hb_006351_020 Hb_003929_180--Hb_006351_020 Hb_015884_020 Hb_015884_020 Hb_002687_200--Hb_015884_020 Hb_000027_200 Hb_000027_200 Hb_002687_200--Hb_000027_200 Hb_002552_040 Hb_002552_040 Hb_002687_200--Hb_002552_040 Hb_002942_230 Hb_002942_230 Hb_002687_200--Hb_002942_230 Hb_000579_080 Hb_000579_080 Hb_000926_060--Hb_000579_080 Hb_070624_010 Hb_070624_010 Hb_000926_060--Hb_070624_010 Hb_000926_060--Hb_000500_220 Hb_000358_210 Hb_000358_210 Hb_000926_060--Hb_000358_210 Hb_000500_220--Hb_002687_200 Hb_011671_120 Hb_011671_120 Hb_000500_220--Hb_011671_120 Hb_000500_220--Hb_009296_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.63287 17.291 60.7046 56.3301 12.424 10.3643
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.2939 14.1047 15.1301 30.7332 40.8521

CAGE analysis