Hb_074399_010

Information

Type -
Description -
Location Contig74399: 3391-16050
Sequence    

Annotation

kegg
ID vvi:100245872
description phragmoplast orienting kinesin-1
nr
ID XP_011011439.1
description PREDICTED: phragmoplast orienting kinesin-1 isoform X1 [Populus euphratica]
swissprot
ID Q27IK7
description Phragmoplast orienting kinesin-1 OS=Arabidopsis thaliana GN=POK1 PE=1 SV=1
trembl
ID A0A061EQC6
description Kinesin-like protein OS=Theobroma cacao GN=TCM_021467 PE=3 SV=1
Gene Ontology
ID GO:0015630
description phragmoplast orienting kinesin-1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56576: 3224-4044 , PASA_asmbl_56577: 4316-6990 , PASA_asmbl_56578: 4906-5211 , PASA_asmbl_56579: 7039-7477 , PASA_asmbl_56580: 7503-8818 , PASA_asmbl_56583: 11451-12199 , PASA_asmbl_56584: 12200-12504 , PASA_asmbl_56585: 12758-14383 , PASA_asmbl_56586: 15621-15861
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074399_010 0.0 - - PREDICTED: phragmoplast orienting kinesin-1 isoform X1 [Populus euphratica]
2 Hb_000703_160 0.0674305697 - - PREDICTED: serine/threonine-protein kinase EDR1 isoform X2 [Jatropha curcas]
3 Hb_029584_120 0.080997335 - - PREDICTED: K(+) efflux antiporter 4 isoform X1 [Jatropha curcas]
4 Hb_000258_220 0.0826708256 - - PREDICTED: probable methyltransferase PMT2 isoform X2 [Jatropha curcas]
5 Hb_003687_080 0.083182885 - - PREDICTED: casein kinase I-like [Jatropha curcas]
6 Hb_007919_110 0.0853980046 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
7 Hb_004013_030 0.0858862193 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
8 Hb_000000_330 0.086254065 - - PREDICTED: uncharacterized protein LOC105633747 [Jatropha curcas]
9 Hb_003449_100 0.0876510363 - - PREDICTED: protein YIPF6 homolog [Jatropha curcas]
10 Hb_000001_090 0.0877388222 - - PREDICTED: uncharacterized protein At3g58460 [Populus euphratica]
11 Hb_000260_490 0.0945353448 - - PREDICTED: probable galacturonosyltransferase 7 isoform X3 [Jatropha curcas]
12 Hb_003540_050 0.0971864415 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
13 Hb_005511_130 0.100781495 - - PREDICTED: transmembrane protein 115-like [Populus euphratica]
14 Hb_001160_110 0.1013803286 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
15 Hb_000753_160 0.1028785506 - - PREDICTED: uncharacterized protein LOC105640669 [Jatropha curcas]
16 Hb_006588_160 0.1047284127 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic isoform X2 [Jatropha curcas]
17 Hb_000497_190 0.1053070142 - - sterol isomerase, putative [Ricinus communis]
18 Hb_004724_390 0.1060402035 - - PREDICTED: nicalin-1-like [Populus euphratica]
19 Hb_164010_050 0.1061914775 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH1 [Jatropha curcas]
20 Hb_002687_180 0.1068787296 - - PREDICTED: phytochrome-associated serine/threonine-protein phosphatase [Jatropha curcas]

Gene co-expression network

sample Hb_074399_010 Hb_074399_010 Hb_000703_160 Hb_000703_160 Hb_074399_010--Hb_000703_160 Hb_029584_120 Hb_029584_120 Hb_074399_010--Hb_029584_120 Hb_000258_220 Hb_000258_220 Hb_074399_010--Hb_000258_220 Hb_003687_080 Hb_003687_080 Hb_074399_010--Hb_003687_080 Hb_007919_110 Hb_007919_110 Hb_074399_010--Hb_007919_110 Hb_004013_030 Hb_004013_030 Hb_074399_010--Hb_004013_030 Hb_003449_100 Hb_003449_100 Hb_000703_160--Hb_003449_100 Hb_000703_160--Hb_007919_110 Hb_005144_210 Hb_005144_210 Hb_000703_160--Hb_005144_210 Hb_161568_010 Hb_161568_010 Hb_000703_160--Hb_161568_010 Hb_000958_080 Hb_000958_080 Hb_000703_160--Hb_000958_080 Hb_000001_090 Hb_000001_090 Hb_029584_120--Hb_000001_090 Hb_029584_120--Hb_000258_220 Hb_004724_390 Hb_004724_390 Hb_029584_120--Hb_004724_390 Hb_000866_070 Hb_000866_070 Hb_029584_120--Hb_000866_070 Hb_002942_230 Hb_002942_230 Hb_029584_120--Hb_002942_230 Hb_000134_120 Hb_000134_120 Hb_000258_220--Hb_000134_120 Hb_000503_020 Hb_000503_020 Hb_000258_220--Hb_000503_020 Hb_000054_040 Hb_000054_040 Hb_000258_220--Hb_000054_040 Hb_003540_080 Hb_003540_080 Hb_000258_220--Hb_003540_080 Hb_001160_110 Hb_001160_110 Hb_003687_080--Hb_001160_110 Hb_000327_330 Hb_000327_330 Hb_003687_080--Hb_000327_330 Hb_003687_080--Hb_000001_090 Hb_005511_130 Hb_005511_130 Hb_003687_080--Hb_005511_130 Hb_000318_220 Hb_000318_220 Hb_003687_080--Hb_000318_220 Hb_007919_110--Hb_003449_100 Hb_000753_160 Hb_000753_160 Hb_007919_110--Hb_000753_160 Hb_002272_240 Hb_002272_240 Hb_007919_110--Hb_002272_240 Hb_012760_030 Hb_012760_030 Hb_007919_110--Hb_012760_030 Hb_003209_130 Hb_003209_130 Hb_007919_110--Hb_003209_130 Hb_006120_050 Hb_006120_050 Hb_007919_110--Hb_006120_050 Hb_006588_160 Hb_006588_160 Hb_004013_030--Hb_006588_160 Hb_000154_050 Hb_000154_050 Hb_004013_030--Hb_000154_050 Hb_006816_190 Hb_006816_190 Hb_004013_030--Hb_006816_190 Hb_001450_020 Hb_001450_020 Hb_004013_030--Hb_001450_020 Hb_000331_140 Hb_000331_140 Hb_004013_030--Hb_000331_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.806379 1.32858 4.10421 3.40713 1.11923 0.948837
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.751673 0.495283 0.69963 1.23642 1.50275

CAGE analysis