Hb_004013_030

Information

Type -
Description -
Location Contig4013: 24891-39076
Sequence    

Annotation

kegg
ID rcu:RCOM_1153030
description Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative (EC:3.1.3.67)
nr
ID XP_002524915.1
description Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
swissprot
ID P60484
description Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN OS=Homo sapiens GN=PTEN PE=1 SV=1
trembl
ID B9SFZ6
description Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative OS=Ricinus communis GN=RCOM_1153030 PE=4 SV=1
Gene Ontology
ID GO:0004725
description phosphatidylinositol -trisphosphate 3-phosphatase and dual-specificity protein phosphatase pten-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39898: 25310-27536 , PASA_asmbl_39899: 25310-34985 , PASA_asmbl_39900: 34987-37455 , PASA_asmbl_39901: 37739-39024
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004013_030 0.0 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
2 Hb_006588_160 0.0732176868 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic isoform X2 [Jatropha curcas]
3 Hb_000154_050 0.0739043191 - - CMP-sialic acid transporter, putative [Ricinus communis]
4 Hb_006816_190 0.0767801856 - - calreticulin family protein [Populus trichocarpa]
5 Hb_001450_020 0.0791382473 - - PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Jatropha curcas]
6 Hb_000331_140 0.0815151559 - - PREDICTED: cycloeucalenol cycloisomerase [Jatropha curcas]
7 Hb_074399_010 0.0858862193 - - PREDICTED: phragmoplast orienting kinesin-1 isoform X1 [Populus euphratica]
8 Hb_000001_090 0.0939891391 - - PREDICTED: uncharacterized protein At3g58460 [Populus euphratica]
9 Hb_004032_370 0.0941785378 - - pyrophosphate-dependent phosphofructokinase [Hevea brasiliensis]
10 Hb_004907_090 0.0981728418 - - ATP binding protein, putative [Ricinus communis]
11 Hb_003687_080 0.1007827056 - - PREDICTED: casein kinase I-like [Jatropha curcas]
12 Hb_016448_010 0.1012263531 - - Protein MYG1, putative [Ricinus communis]
13 Hb_002837_040 0.1033617835 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]
14 Hb_002686_300 0.1041975066 - - adenosine diphosphatase, putative [Ricinus communis]
15 Hb_000497_190 0.1044930158 - - sterol isomerase, putative [Ricinus communis]
16 Hb_001279_090 0.1068476728 - - PREDICTED: uncharacterized protein LOC105633322 [Jatropha curcas]
17 Hb_000724_020 0.1068700907 transcription factor TF Family: PHD PREDICTED: probable Histone-lysine N-methyltransferase ATXR5 [Jatropha curcas]
18 Hb_000703_160 0.1075931621 - - PREDICTED: serine/threonine-protein kinase EDR1 isoform X2 [Jatropha curcas]
19 Hb_001160_110 0.1085201208 - - PREDICTED: kinesin-related protein 13 [Jatropha curcas]
20 Hb_000645_070 0.1085672405 - - aldehyde dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_004013_030 Hb_004013_030 Hb_006588_160 Hb_006588_160 Hb_004013_030--Hb_006588_160 Hb_000154_050 Hb_000154_050 Hb_004013_030--Hb_000154_050 Hb_006816_190 Hb_006816_190 Hb_004013_030--Hb_006816_190 Hb_001450_020 Hb_001450_020 Hb_004013_030--Hb_001450_020 Hb_000331_140 Hb_000331_140 Hb_004013_030--Hb_000331_140 Hb_074399_010 Hb_074399_010 Hb_004013_030--Hb_074399_010 Hb_006588_160--Hb_000154_050 Hb_000001_090 Hb_000001_090 Hb_006588_160--Hb_000001_090 Hb_001053_080 Hb_001053_080 Hb_006588_160--Hb_001053_080 Hb_002837_040 Hb_002837_040 Hb_006588_160--Hb_002837_040 Hb_006588_160--Hb_001450_020 Hb_005064_010 Hb_005064_010 Hb_000154_050--Hb_005064_010 Hb_000154_050--Hb_002837_040 Hb_002871_140 Hb_002871_140 Hb_000154_050--Hb_002871_140 Hb_000261_210 Hb_000261_210 Hb_000154_050--Hb_000261_210 Hb_001623_490 Hb_001623_490 Hb_006816_190--Hb_001623_490 Hb_000645_180 Hb_000645_180 Hb_006816_190--Hb_000645_180 Hb_000645_070 Hb_000645_070 Hb_006816_190--Hb_000645_070 Hb_004907_090 Hb_004907_090 Hb_006816_190--Hb_004907_090 Hb_003687_080 Hb_003687_080 Hb_006816_190--Hb_003687_080 Hb_001450_020--Hb_000154_050 Hb_000497_190 Hb_000497_190 Hb_001450_020--Hb_000497_190 Hb_004032_370 Hb_004032_370 Hb_001450_020--Hb_004032_370 Hb_001279_090 Hb_001279_090 Hb_001450_020--Hb_001279_090 Hb_000331_140--Hb_000154_050 Hb_007786_030 Hb_007786_030 Hb_000331_140--Hb_007786_030 Hb_000331_140--Hb_001450_020 Hb_000331_140--Hb_074399_010 Hb_000331_140--Hb_006588_160 Hb_000703_160 Hb_000703_160 Hb_074399_010--Hb_000703_160 Hb_029584_120 Hb_029584_120 Hb_074399_010--Hb_029584_120 Hb_000258_220 Hb_000258_220 Hb_074399_010--Hb_000258_220 Hb_074399_010--Hb_003687_080 Hb_007919_110 Hb_007919_110 Hb_074399_010--Hb_007919_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.81295 4.37084 21.0634 13.6953 6.84443 5.26251
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.88693 2.47334 3.46165 5.17659 9.12099

CAGE analysis