Hb_000331_140

Information

Type -
Description -
Location Contig331: 124511-128458
Sequence    

Annotation

kegg
ID rcu:RCOM_1506630
description Cycloeucalenol cycloisomerase, putative (EC:5.5.1.9)
nr
ID XP_012079863.1
description PREDICTED: cycloeucalenol cycloisomerase [Jatropha curcas]
swissprot
ID Q9M643
description Cycloeucalenol cycloisomerase OS=Arabidopsis thaliana GN=CPI1 PE=2 SV=1
trembl
ID A0A067K7D2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11314 PE=4 SV=1
Gene Ontology
ID GO:0047793
description cycloeucalenol cycloisomerase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34765: 124484-128470
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000331_140 0.0 - - PREDICTED: cycloeucalenol cycloisomerase [Jatropha curcas]
2 Hb_004013_030 0.0815151559 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
3 Hb_000154_050 0.0938764148 - - CMP-sialic acid transporter, putative [Ricinus communis]
4 Hb_007786_030 0.1015793476 - - PREDICTED: ribonucleoside-diphosphate reductase large subunit [Jatropha curcas]
5 Hb_001450_020 0.1058085892 - - PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Jatropha curcas]
6 Hb_074399_010 0.1105910543 - - PREDICTED: phragmoplast orienting kinesin-1 isoform X1 [Populus euphratica]
7 Hb_006588_160 0.1115151473 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic isoform X2 [Jatropha curcas]
8 Hb_000103_120 0.1121475861 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X2 [Jatropha curcas]
9 Hb_000000_330 0.1125581419 - - PREDICTED: uncharacterized protein LOC105633747 [Jatropha curcas]
10 Hb_000497_190 0.1133467669 - - sterol isomerase, putative [Ricinus communis]
11 Hb_004032_370 0.1196422305 - - pyrophosphate-dependent phosphofructokinase [Hevea brasiliensis]
12 Hb_002783_220 0.122553905 - - PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]
13 Hb_000645_070 0.1241927113 - - aldehyde dehydrogenase, putative [Ricinus communis]
14 Hb_000258_220 0.1250655874 - - PREDICTED: probable methyltransferase PMT2 isoform X2 [Jatropha curcas]
15 Hb_004096_060 0.1255110131 - - PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Jatropha curcas]
16 Hb_000056_160 0.126016449 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Jatropha curcas]
17 Hb_002837_040 0.1265981342 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]
18 Hb_005064_010 0.1274347732 - - PREDICTED: kelch repeat-containing protein At3g27220-like [Jatropha curcas]
19 Hb_006816_190 0.1275864289 - - calreticulin family protein [Populus trichocarpa]
20 Hb_000261_210 0.1279504527 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]

Gene co-expression network

sample Hb_000331_140 Hb_000331_140 Hb_004013_030 Hb_004013_030 Hb_000331_140--Hb_004013_030 Hb_000154_050 Hb_000154_050 Hb_000331_140--Hb_000154_050 Hb_007786_030 Hb_007786_030 Hb_000331_140--Hb_007786_030 Hb_001450_020 Hb_001450_020 Hb_000331_140--Hb_001450_020 Hb_074399_010 Hb_074399_010 Hb_000331_140--Hb_074399_010 Hb_006588_160 Hb_006588_160 Hb_000331_140--Hb_006588_160 Hb_004013_030--Hb_006588_160 Hb_004013_030--Hb_000154_050 Hb_006816_190 Hb_006816_190 Hb_004013_030--Hb_006816_190 Hb_004013_030--Hb_001450_020 Hb_004013_030--Hb_074399_010 Hb_005064_010 Hb_005064_010 Hb_000154_050--Hb_005064_010 Hb_000154_050--Hb_006588_160 Hb_002837_040 Hb_002837_040 Hb_000154_050--Hb_002837_040 Hb_002871_140 Hb_002871_140 Hb_000154_050--Hb_002871_140 Hb_000261_210 Hb_000261_210 Hb_000154_050--Hb_000261_210 Hb_010381_010 Hb_010381_010 Hb_007786_030--Hb_010381_010 Hb_007786_030--Hb_005064_010 Hb_004064_040 Hb_004064_040 Hb_007786_030--Hb_004064_040 Hb_010655_020 Hb_010655_020 Hb_007786_030--Hb_010655_020 Hb_000056_160 Hb_000056_160 Hb_007786_030--Hb_000056_160 Hb_001450_020--Hb_006588_160 Hb_001450_020--Hb_000154_050 Hb_000497_190 Hb_000497_190 Hb_001450_020--Hb_000497_190 Hb_004032_370 Hb_004032_370 Hb_001450_020--Hb_004032_370 Hb_001279_090 Hb_001279_090 Hb_001450_020--Hb_001279_090 Hb_000703_160 Hb_000703_160 Hb_074399_010--Hb_000703_160 Hb_029584_120 Hb_029584_120 Hb_074399_010--Hb_029584_120 Hb_000258_220 Hb_000258_220 Hb_074399_010--Hb_000258_220 Hb_003687_080 Hb_003687_080 Hb_074399_010--Hb_003687_080 Hb_007919_110 Hb_007919_110 Hb_074399_010--Hb_007919_110 Hb_000001_090 Hb_000001_090 Hb_006588_160--Hb_000001_090 Hb_001053_080 Hb_001053_080 Hb_006588_160--Hb_001053_080 Hb_006588_160--Hb_002837_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.49091 2.46822 17.3347 13.7697 6.38794 5.15538
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.17399 1.47242 3.21504 5.41134 5.43128

CAGE analysis