Hb_000134_120

Information

Type -
Description -
Location Contig134: 74894-79748
Sequence    

Annotation

kegg
ID pop:POPTR_0001s27790g
description POPTRDRAFT_815424; hypothetical protein
nr
ID XP_012065516.1
description PREDICTED: uncharacterized protein LOC105628669 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L856
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16720 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09601: 68367-74028 , PASA_asmbl_09602: 68588-74028 , PASA_asmbl_09605: 75111-79471
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000134_120 0.0 - - PREDICTED: uncharacterized protein LOC105628669 [Jatropha curcas]
2 Hb_000258_220 0.0804309018 - - PREDICTED: probable methyltransferase PMT2 isoform X2 [Jatropha curcas]
3 Hb_003209_130 0.0870262929 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
4 Hb_003964_080 0.0939999386 - - PREDICTED: probable methyltransferase PMT5 [Jatropha curcas]
5 Hb_029584_120 0.0966292345 - - PREDICTED: K(+) efflux antiporter 4 isoform X1 [Jatropha curcas]
6 Hb_007919_110 0.1012367482 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
7 Hb_000926_340 0.103959073 - - PREDICTED: EH domain-containing protein 1 isoform X1 [Jatropha curcas]
8 Hb_001009_150 0.1049762244 - - Glyceraldehyde-3-phosphate dehydrogenase [Gossypium arboreum]
9 Hb_000256_230 0.1051337859 - - PREDICTED: uncharacterized protein LOC105637594 [Jatropha curcas]
10 Hb_000003_030 0.1053576604 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000622_110 0.1053667325 - - cmp-sialic acid transporter, putative [Ricinus communis]
12 Hb_005062_110 0.1054936105 - - PREDICTED: transmembrane 9 superfamily member 1 [Jatropha curcas]
13 Hb_002486_050 0.1064309413 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
14 Hb_000753_160 0.1080440357 - - PREDICTED: uncharacterized protein LOC105640669 [Jatropha curcas]
15 Hb_002217_320 0.1088468622 - - PREDICTED: probable O-acetyltransferase CAS1 isoform X2 [Jatropha curcas]
16 Hb_012760_030 0.1093475979 - - PREDICTED: probable prolyl 4-hydroxylase 10 [Gossypium raimondii]
17 Hb_004126_040 0.1104670224 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000503_020 0.1115035676 - - PREDICTED: calcium-dependent protein kinase 13 [Jatropha curcas]
19 Hb_003540_080 0.1118270575 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
20 Hb_002739_120 0.1137100461 - - PREDICTED: zinc finger protein ZPR1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000134_120 Hb_000134_120 Hb_000258_220 Hb_000258_220 Hb_000134_120--Hb_000258_220 Hb_003209_130 Hb_003209_130 Hb_000134_120--Hb_003209_130 Hb_003964_080 Hb_003964_080 Hb_000134_120--Hb_003964_080 Hb_029584_120 Hb_029584_120 Hb_000134_120--Hb_029584_120 Hb_007919_110 Hb_007919_110 Hb_000134_120--Hb_007919_110 Hb_000926_340 Hb_000926_340 Hb_000134_120--Hb_000926_340 Hb_000258_220--Hb_029584_120 Hb_000503_020 Hb_000503_020 Hb_000258_220--Hb_000503_020 Hb_074399_010 Hb_074399_010 Hb_000258_220--Hb_074399_010 Hb_000054_040 Hb_000054_040 Hb_000258_220--Hb_000054_040 Hb_003540_080 Hb_003540_080 Hb_000258_220--Hb_003540_080 Hb_002486_050 Hb_002486_050 Hb_003209_130--Hb_002486_050 Hb_000256_230 Hb_000256_230 Hb_003209_130--Hb_000256_230 Hb_000665_170 Hb_000665_170 Hb_003209_130--Hb_000665_170 Hb_005535_080 Hb_005535_080 Hb_003209_130--Hb_005535_080 Hb_000622_110 Hb_000622_110 Hb_003209_130--Hb_000622_110 Hb_004126_040 Hb_004126_040 Hb_003209_130--Hb_004126_040 Hb_000753_160 Hb_000753_160 Hb_003964_080--Hb_000753_160 Hb_003964_080--Hb_007919_110 Hb_002217_320 Hb_002217_320 Hb_003964_080--Hb_002217_320 Hb_005511_130 Hb_005511_130 Hb_003964_080--Hb_005511_130 Hb_002374_270 Hb_002374_270 Hb_003964_080--Hb_002374_270 Hb_000001_090 Hb_000001_090 Hb_029584_120--Hb_000001_090 Hb_029584_120--Hb_074399_010 Hb_004724_390 Hb_004724_390 Hb_029584_120--Hb_004724_390 Hb_000866_070 Hb_000866_070 Hb_029584_120--Hb_000866_070 Hb_002942_230 Hb_002942_230 Hb_029584_120--Hb_002942_230 Hb_003449_100 Hb_003449_100 Hb_007919_110--Hb_003449_100 Hb_007919_110--Hb_000753_160 Hb_002272_240 Hb_002272_240 Hb_007919_110--Hb_002272_240 Hb_012760_030 Hb_012760_030 Hb_007919_110--Hb_012760_030 Hb_007919_110--Hb_003209_130 Hb_006120_050 Hb_006120_050 Hb_007919_110--Hb_006120_050 Hb_000926_340--Hb_000622_110 Hb_000926_340--Hb_004126_040 Hb_000418_020 Hb_000418_020 Hb_000926_340--Hb_000418_020 Hb_000926_340--Hb_000256_230 Hb_000926_340--Hb_002486_050 Hb_000926_340--Hb_003209_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.09643 7.64001 13.2953 23.4921 5.07244 4.01971
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.34457 1.98997 2.87919 7.37011 6.96174

CAGE analysis