Hb_003878_050

Information

Type -
Description -
Location Contig3878: 56075-57883
Sequence    

Annotation

kegg
ID rcu:RCOM_0105720
description Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A, putative (EC:3.5.1.52)
nr
ID XP_012075806.1
description PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
swissprot
ID P81898
description Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A OS=Prunus dulcis PE=1 SV=2
trembl
ID A0A067KF92
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10547 PE=4 SV=1
Gene Ontology
ID GO:0005774
description peptide-n4-(n-acetyl-beta-glucosaminyl)asparagine amidase a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003878_050 0.0 - - PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Jatropha curcas]
2 Hb_026889_040 0.1338324163 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
3 Hb_000477_040 0.1342173587 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000703_280 0.161631428 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
5 Hb_004158_020 0.1622743035 - - Rab1 [Hevea brasiliensis]
6 Hb_001369_630 0.1626493361 - - PREDICTED: UDP-glucuronate 4-epimerase 3-like [Jatropha curcas]
7 Hb_000935_040 0.1649063254 - - Uncharacterized protein isoform 2 [Theobroma cacao]
8 Hb_000210_100 0.1673326835 - - pepsin A, putative [Ricinus communis]
9 Hb_006711_090 0.1715570223 - - PREDICTED: fatty acid 2-hydroxylase 1-like [Jatropha curcas]
10 Hb_069355_010 0.1717807891 - - NBS-LRR resistance protein RGH2 [Manihot esculenta]
11 Hb_000086_290 0.1753137766 - - PREDICTED: TBC1 domain family member 15-like [Jatropha curcas]
12 Hb_000110_060 0.1757972422 - - PREDICTED: uncharacterized protein LOC105636258 [Jatropha curcas]
13 Hb_027073_010 0.1772143933 - - PREDICTED: protein CHROMOSOME TRANSMISSION FIDELITY 7 [Jatropha curcas]
14 Hb_000260_280 0.1789508732 - - auxin:hydrogen symporter, putative [Ricinus communis]
15 Hb_000010_310 0.1792938569 - - PREDICTED: probable pectate lyase 18 [Populus euphratica]
16 Hb_002007_320 0.1815386654 - - PREDICTED: mitogen-activated protein kinase kinase kinase ANP1 [Jatropha curcas]
17 Hb_000023_310 0.1825298887 - - PREDICTED: probable folate-biopterin transporter 2 [Populus euphratica]
18 Hb_000062_090 0.1831596818 - - PREDICTED: uncharacterized protein LOC105644743 isoform X2 [Jatropha curcas]
19 Hb_001904_050 0.1845344484 - - alpha-tubulin 1 [Hevea brasiliensis]
20 Hb_000032_450 0.1845680674 - - PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]

Gene co-expression network

sample Hb_003878_050 Hb_003878_050 Hb_026889_040 Hb_026889_040 Hb_003878_050--Hb_026889_040 Hb_000477_040 Hb_000477_040 Hb_003878_050--Hb_000477_040 Hb_000703_280 Hb_000703_280 Hb_003878_050--Hb_000703_280 Hb_004158_020 Hb_004158_020 Hb_003878_050--Hb_004158_020 Hb_001369_630 Hb_001369_630 Hb_003878_050--Hb_001369_630 Hb_000935_040 Hb_000935_040 Hb_003878_050--Hb_000935_040 Hb_000019_180 Hb_000019_180 Hb_026889_040--Hb_000019_180 Hb_026889_040--Hb_004158_020 Hb_091349_010 Hb_091349_010 Hb_026889_040--Hb_091349_010 Hb_026889_040--Hb_000703_280 Hb_011861_100 Hb_011861_100 Hb_026889_040--Hb_011861_100 Hb_005470_030 Hb_005470_030 Hb_000477_040--Hb_005470_030 Hb_000849_120 Hb_000849_120 Hb_000477_040--Hb_000849_120 Hb_000110_060 Hb_000110_060 Hb_000477_040--Hb_000110_060 Hb_000465_320 Hb_000465_320 Hb_000477_040--Hb_000465_320 Hb_001904_050 Hb_001904_050 Hb_000477_040--Hb_001904_050 Hb_000103_250 Hb_000103_250 Hb_000703_280--Hb_000103_250 Hb_000012_080 Hb_000012_080 Hb_000703_280--Hb_000012_080 Hb_021943_090 Hb_021943_090 Hb_000703_280--Hb_021943_090 Hb_000703_280--Hb_001904_050 Hb_000244_170 Hb_000244_170 Hb_000703_280--Hb_000244_170 Hb_002110_100 Hb_002110_100 Hb_004158_020--Hb_002110_100 Hb_000402_130 Hb_000402_130 Hb_004158_020--Hb_000402_130 Hb_032920_070 Hb_032920_070 Hb_004158_020--Hb_032920_070 Hb_001754_080 Hb_001754_080 Hb_004158_020--Hb_001754_080 Hb_004007_110 Hb_004007_110 Hb_004158_020--Hb_004007_110 Hb_000023_310 Hb_000023_310 Hb_004158_020--Hb_000023_310 Hb_001369_630--Hb_000935_040 Hb_000696_070 Hb_000696_070 Hb_001369_630--Hb_000696_070 Hb_002007_320 Hb_002007_320 Hb_001369_630--Hb_002007_320 Hb_000808_150 Hb_000808_150 Hb_001369_630--Hb_000808_150 Hb_003371_070 Hb_003371_070 Hb_001369_630--Hb_003371_070 Hb_000049_160 Hb_000049_160 Hb_001369_630--Hb_000049_160 Hb_000935_040--Hb_002007_320 Hb_000935_040--Hb_000012_080 Hb_000152_440 Hb_000152_440 Hb_000935_040--Hb_000152_440 Hb_000139_300 Hb_000139_300 Hb_000935_040--Hb_000139_300 Hb_000086_210 Hb_000086_210 Hb_000935_040--Hb_000086_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.371214 0.355927 1.46499 4.41639 0.118654 0.079931
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.454365 1.09234 2.21569 1.24971 1.58997

CAGE analysis