Hb_000465_320

Information

Type -
Description -
Location Contig465: 279026-283493
Sequence    

Annotation

kegg
ID rcu:RCOM_0006430
description mutt domain protein, putative (EC:3.6.1.22)
nr
ID XP_012070053.1
description PREDICTED: nudix hydrolase 8 [Jatropha curcas]
swissprot
ID Q8L7W2
description Nudix hydrolase 8 OS=Arabidopsis thaliana GN=NUDT8 PE=2 SV=2
trembl
ID A0A067KUM7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03447 PE=3 SV=1
Gene Ontology
ID GO:0005829
description nudix hydrolase 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43996: 279160-283068 , PASA_asmbl_43997: 282409-282775
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000465_320 0.0 - - PREDICTED: nudix hydrolase 8 [Jatropha curcas]
2 Hb_003453_050 0.1481745805 - - PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-3-like [Jatropha curcas]
3 Hb_031527_110 0.148656383 - - PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]
4 Hb_000477_040 0.1561272155 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000107_510 0.1619727579 - - phosphate transporter [Manihot esculenta]
6 Hb_011606_020 0.1627884109 - - hypothetical protein CISIN_1g023687mg [Citrus sinensis]
7 Hb_001481_130 0.1650589494 - - conserved hypothetical protein [Ricinus communis]
8 Hb_011139_040 0.1655601339 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X2 [Jatropha curcas]
9 Hb_007441_080 0.1655668511 - - PREDICTED: ELMO domain-containing protein C-like [Jatropha curcas]
10 Hb_011224_100 0.1656284303 - - conserved hypothetical protein [Ricinus communis]
11 Hb_025466_010 0.1702586873 - - unnamed protein product [Vitis vinifera]
12 Hb_002174_040 0.170313206 - - DNAJ heat shock family protein [Theobroma cacao]
13 Hb_001671_030 0.1762986898 - - PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type [Jatropha curcas]
14 Hb_003875_030 0.1768299844 - - PREDICTED: probable plastidic glucose transporter 1 [Jatropha curcas]
15 Hb_000849_120 0.1777210693 - - PREDICTED: linoleate 9S-lipoxygenase 6-like [Jatropha curcas]
16 Hb_015675_030 0.1777563907 - - PREDICTED: UMP-CMP kinase 3 isoform X2 [Jatropha curcas]
17 Hb_020378_060 0.1814415865 - - PREDICTED: methyltransferase-like protein 13 [Jatropha curcas]
18 Hb_001663_040 0.1849310751 - - hypothetical protein B456_007G162000 [Gossypium raimondii]
19 Hb_000240_030 0.1851901918 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001863_020 0.1857101766 - - PREDICTED: protein FAM91A1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000465_320 Hb_000465_320 Hb_003453_050 Hb_003453_050 Hb_000465_320--Hb_003453_050 Hb_031527_110 Hb_031527_110 Hb_000465_320--Hb_031527_110 Hb_000477_040 Hb_000477_040 Hb_000465_320--Hb_000477_040 Hb_000107_510 Hb_000107_510 Hb_000465_320--Hb_000107_510 Hb_011606_020 Hb_011606_020 Hb_000465_320--Hb_011606_020 Hb_001481_130 Hb_001481_130 Hb_000465_320--Hb_001481_130 Hb_000622_290 Hb_000622_290 Hb_003453_050--Hb_000622_290 Hb_001946_380 Hb_001946_380 Hb_003453_050--Hb_001946_380 Hb_003453_050--Hb_011606_020 Hb_000365_370 Hb_000365_370 Hb_003453_050--Hb_000365_370 Hb_007441_080 Hb_007441_080 Hb_003453_050--Hb_007441_080 Hb_001671_030 Hb_001671_030 Hb_003453_050--Hb_001671_030 Hb_002174_040 Hb_002174_040 Hb_031527_110--Hb_002174_040 Hb_001904_050 Hb_001904_050 Hb_031527_110--Hb_001904_050 Hb_000962_070 Hb_000962_070 Hb_031527_110--Hb_000962_070 Hb_000181_350 Hb_000181_350 Hb_031527_110--Hb_000181_350 Hb_042083_040 Hb_042083_040 Hb_031527_110--Hb_042083_040 Hb_031527_110--Hb_007441_080 Hb_005470_030 Hb_005470_030 Hb_000477_040--Hb_005470_030 Hb_003878_050 Hb_003878_050 Hb_000477_040--Hb_003878_050 Hb_000849_120 Hb_000849_120 Hb_000477_040--Hb_000849_120 Hb_000110_060 Hb_000110_060 Hb_000477_040--Hb_000110_060 Hb_000477_040--Hb_001904_050 Hb_062522_010 Hb_062522_010 Hb_000107_510--Hb_062522_010 Hb_000167_050 Hb_000167_050 Hb_000107_510--Hb_000167_050 Hb_000107_510--Hb_031527_110 Hb_000107_510--Hb_000365_370 Hb_000107_510--Hb_001904_050 Hb_000107_510--Hb_002174_040 Hb_000116_130 Hb_000116_130 Hb_011606_020--Hb_000116_130 Hb_000107_430 Hb_000107_430 Hb_011606_020--Hb_000107_430 Hb_001226_140 Hb_001226_140 Hb_011606_020--Hb_001226_140 Hb_001080_300 Hb_001080_300 Hb_011606_020--Hb_001080_300 Hb_002110_100 Hb_002110_100 Hb_011606_020--Hb_002110_100 Hb_011139_040 Hb_011139_040 Hb_011606_020--Hb_011139_040 Hb_005348_110 Hb_005348_110 Hb_001481_130--Hb_005348_110 Hb_001481_130--Hb_011139_040 Hb_001481_130--Hb_000849_120 Hb_069355_010 Hb_069355_010 Hb_001481_130--Hb_069355_010 Hb_033413_010 Hb_033413_010 Hb_001481_130--Hb_033413_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.914695 4.09907 10.3002 22.6279 2.09397 3.4643
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.93772 6.59854 16.9621 2.19399 20.4303

CAGE analysis