Hb_001221_330

Information

Type -
Description -
Location Contig1221: 237098-239425
Sequence    

Annotation

kegg
ID rcu:RCOM_1505850
description hypothetical protein
nr
ID XP_012090686.1
description PREDICTED: uncharacterized protein LOC105648791 [Jatropha curcas]
swissprot
ID Q9FH28
description Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2 SV=2
trembl
ID A0A067JRJ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26441 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001221_330 0.0 - - PREDICTED: uncharacterized protein LOC105648791 [Jatropha curcas]
2 Hb_005181_160 0.1315035153 - - PREDICTED: uncharacterized protein LOC105643546 [Jatropha curcas]
3 Hb_083940_010 0.152238815 - - Zeamatin precursor, putative [Ricinus communis]
4 Hb_022250_020 0.1548177308 - - PREDICTED: uncharacterized protein LOC105648703 [Jatropha curcas]
5 Hb_000189_170 0.1558835525 - - calcium ion binding protein, putative [Ricinus communis]
6 Hb_002217_100 0.1600305124 rubber biosynthesis Gene Name: Dihydrolipoamide dehydrogenase dihydrolipoamide dehydrogenase, putative [Ricinus communis]
7 Hb_004931_110 0.1635690147 - - inorganic phosphate transporter, putative [Ricinus communis]
8 Hb_001016_100 0.1635915377 - - PREDICTED: V-type proton ATPase subunit E-like [Pyrus x bretschneideri]
9 Hb_002045_060 0.1657012313 - - PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial [Jatropha curcas]
10 Hb_000487_120 0.1665745915 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001486_010 0.1677059253 - - adenylsulfate kinase, putative [Ricinus communis]
12 Hb_000771_060 0.1681976116 - - PREDICTED: spermine synthase [Jatropha curcas]
13 Hb_000008_400 0.1687943384 - - PREDICTED: classical arabinogalactan protein 10-like [Nicotiana tomentosiformis]
14 Hb_000368_030 0.1711705314 - - PREDICTED: cytokinin dehydrogenase 5 [Jatropha curcas]
15 Hb_001147_050 0.1717715488 - - PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic [Jatropha curcas]
16 Hb_002374_080 0.1725393973 - - PREDICTED: chloroplast processing peptidase-like isoform X1 [Jatropha curcas]
17 Hb_075247_010 0.1730160795 - - PREDICTED: actin-depolymerizing factor 2-like [Nelumbo nucifera]
18 Hb_001817_100 0.1764058927 - - PREDICTED: deoxyhypusine hydroxylase [Jatropha curcas]
19 Hb_002249_070 0.1766446248 - - gcn4-complementing protein, putative [Ricinus communis]
20 Hb_002783_110 0.1777696665 - - Zeamatin precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_001221_330 Hb_001221_330 Hb_005181_160 Hb_005181_160 Hb_001221_330--Hb_005181_160 Hb_083940_010 Hb_083940_010 Hb_001221_330--Hb_083940_010 Hb_022250_020 Hb_022250_020 Hb_001221_330--Hb_022250_020 Hb_000189_170 Hb_000189_170 Hb_001221_330--Hb_000189_170 Hb_002217_100 Hb_002217_100 Hb_001221_330--Hb_002217_100 Hb_004931_110 Hb_004931_110 Hb_001221_330--Hb_004931_110 Hb_000025_370 Hb_000025_370 Hb_005181_160--Hb_000025_370 Hb_007741_130 Hb_007741_130 Hb_005181_160--Hb_007741_130 Hb_004005_020 Hb_004005_020 Hb_005181_160--Hb_004005_020 Hb_000368_030 Hb_000368_030 Hb_005181_160--Hb_000368_030 Hb_002249_070 Hb_002249_070 Hb_005181_160--Hb_002249_070 Hb_001147_050 Hb_001147_050 Hb_083940_010--Hb_001147_050 Hb_000193_260 Hb_000193_260 Hb_083940_010--Hb_000193_260 Hb_083940_010--Hb_000189_170 Hb_002534_130 Hb_002534_130 Hb_083940_010--Hb_002534_130 Hb_005214_170 Hb_005214_170 Hb_083940_010--Hb_005214_170 Hb_001545_070 Hb_001545_070 Hb_022250_020--Hb_001545_070 Hb_022250_020--Hb_083940_010 Hb_022250_020--Hb_000189_170 Hb_006153_040 Hb_006153_040 Hb_022250_020--Hb_006153_040 Hb_000487_120 Hb_000487_120 Hb_022250_020--Hb_000487_120 Hb_010172_110 Hb_010172_110 Hb_000189_170--Hb_010172_110 Hb_003055_110 Hb_003055_110 Hb_000189_170--Hb_003055_110 Hb_007002_040 Hb_007002_040 Hb_000189_170--Hb_007002_040 Hb_114310_100 Hb_114310_100 Hb_000189_170--Hb_114310_100 Hb_001817_100 Hb_001817_100 Hb_002217_100--Hb_001817_100 Hb_002615_030 Hb_002615_030 Hb_002217_100--Hb_002615_030 Hb_001016_100 Hb_001016_100 Hb_002217_100--Hb_001016_100 Hb_007590_090 Hb_007590_090 Hb_002217_100--Hb_007590_090 Hb_002045_060 Hb_002045_060 Hb_002217_100--Hb_002045_060 Hb_000964_030 Hb_000964_030 Hb_002217_100--Hb_000964_030 Hb_093458_010 Hb_093458_010 Hb_004931_110--Hb_093458_010 Hb_000300_700 Hb_000300_700 Hb_004931_110--Hb_000300_700 Hb_000008_400 Hb_000008_400 Hb_004931_110--Hb_000008_400 Hb_004931_110--Hb_002217_100 Hb_002671_090 Hb_002671_090 Hb_004931_110--Hb_002671_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0480751 0.227607 0.955807 0.653683 0.0887813 0.0594365
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.343702 0.585972 0.915167 0.459666 0.286951

CAGE analysis