Hb_000300_700

Information

Type -
Description -
Location Contig300: 608157-612103
Sequence    

Annotation

kegg
ID rcu:RCOM_1121520
description adenylsulfate kinase, putative (EC:1.3.1.74)
nr
ID XP_012070448.1
description PREDICTED: adenylyl-sulfate kinase 3 [Jatropha curcas]
swissprot
ID Q9SRW7
description Adenylyl-sulfate kinase 3 OS=Arabidopsis thaliana GN=APK3 PE=1 SV=1
trembl
ID A0A067L5F5
description Adenylyl-sulfate kinase OS=Jatropha curcas GN=JCGZ_02720 PE=3 SV=1
Gene Ontology
ID GO:0005829
description adenylyl-sulfate kinase 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31645: 608197-608684
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000300_700 0.0 - - PREDICTED: adenylyl-sulfate kinase 3 [Jatropha curcas]
2 Hb_009111_020 0.1070128726 - - PREDICTED: calcium-dependent protein kinase 20-like [Jatropha curcas]
3 Hb_000008_400 0.1180208251 - - PREDICTED: classical arabinogalactan protein 10-like [Nicotiana tomentosiformis]
4 Hb_002671_090 0.1312474208 - - PREDICTED: guanylate kinase 2 [Jatropha curcas]
5 Hb_004931_110 0.1394745845 - - inorganic phosphate transporter, putative [Ricinus communis]
6 Hb_065525_120 0.1490033657 - - dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
7 Hb_004965_110 0.1513089222 - - PREDICTED: folylpolyglutamate synthase [Jatropha curcas]
8 Hb_002333_070 0.1515608701 - - PREDICTED: ACT domain-containing protein ACR4-like [Jatropha curcas]
9 Hb_001486_250 0.151795731 - - PREDICTED: uncharacterized protein LOC105632605 [Jatropha curcas]
10 Hb_000122_190 0.1532061724 - - PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic [Jatropha curcas]
11 Hb_003549_080 0.1536391723 - - PREDICTED: importin subunit alpha-4 isoform X2 [Jatropha curcas]
12 Hb_154038_020 0.1548733456 - - hypothetical protein JCGZ_05648 [Jatropha curcas]
13 Hb_002028_090 0.1593590792 - - PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Jatropha curcas]
14 Hb_001904_050 0.1636641553 - - alpha-tubulin 1 [Hevea brasiliensis]
15 Hb_004984_030 0.1659335769 - - protein with unknown function [Ricinus communis]
16 Hb_000189_570 0.165938747 - - PREDICTED: uncharacterized protein LOC105647652 [Jatropha curcas]
17 Hb_002968_040 0.1711161241 - - PREDICTED: 26S protease regulatory subunit 7-like [Jatropha curcas]
18 Hb_000832_190 0.172504006 - - Rab3 [Hevea brasiliensis]
19 Hb_000107_510 0.1727206554 - - phosphate transporter [Manihot esculenta]
20 Hb_004814_010 0.1727732006 - - PREDICTED: uncharacterized protein LOC105633486 [Jatropha curcas]

Gene co-expression network

sample Hb_000300_700 Hb_000300_700 Hb_009111_020 Hb_009111_020 Hb_000300_700--Hb_009111_020 Hb_000008_400 Hb_000008_400 Hb_000300_700--Hb_000008_400 Hb_002671_090 Hb_002671_090 Hb_000300_700--Hb_002671_090 Hb_004931_110 Hb_004931_110 Hb_000300_700--Hb_004931_110 Hb_065525_120 Hb_065525_120 Hb_000300_700--Hb_065525_120 Hb_004965_110 Hb_004965_110 Hb_000300_700--Hb_004965_110 Hb_003549_080 Hb_003549_080 Hb_009111_020--Hb_003549_080 Hb_002333_070 Hb_002333_070 Hb_009111_020--Hb_002333_070 Hb_000122_190 Hb_000122_190 Hb_009111_020--Hb_000122_190 Hb_000256_040 Hb_000256_040 Hb_009111_020--Hb_000256_040 Hb_001486_010 Hb_001486_010 Hb_009111_020--Hb_001486_010 Hb_000771_060 Hb_000771_060 Hb_000008_400--Hb_000771_060 Hb_154038_020 Hb_154038_020 Hb_000008_400--Hb_154038_020 Hb_000008_400--Hb_065525_120 Hb_000008_400--Hb_004931_110 Hb_000815_290 Hb_000815_290 Hb_000008_400--Hb_000815_290 Hb_000025_370 Hb_000025_370 Hb_002671_090--Hb_000025_370 Hb_002028_090 Hb_002028_090 Hb_002671_090--Hb_002028_090 Hb_001959_010 Hb_001959_010 Hb_002671_090--Hb_001959_010 Hb_002260_010 Hb_002260_010 Hb_002671_090--Hb_002260_010 Hb_001188_030 Hb_001188_030 Hb_002671_090--Hb_001188_030 Hb_093458_010 Hb_093458_010 Hb_004931_110--Hb_093458_010 Hb_002217_100 Hb_002217_100 Hb_004931_110--Hb_002217_100 Hb_004931_110--Hb_002671_090 Hb_001221_330 Hb_001221_330 Hb_004931_110--Hb_001221_330 Hb_000032_370 Hb_000032_370 Hb_065525_120--Hb_000032_370 Hb_027298_010 Hb_027298_010 Hb_065525_120--Hb_027298_010 Hb_009780_050 Hb_009780_050 Hb_065525_120--Hb_009780_050 Hb_065525_120--Hb_154038_020 Hb_001671_030 Hb_001671_030 Hb_065525_120--Hb_001671_030 Hb_007441_080 Hb_007441_080 Hb_065525_120--Hb_007441_080 Hb_003266_030 Hb_003266_030 Hb_004965_110--Hb_003266_030 Hb_007904_230 Hb_007904_230 Hb_004965_110--Hb_007904_230 Hb_011671_260 Hb_011671_260 Hb_004965_110--Hb_011671_260 Hb_006132_090 Hb_006132_090 Hb_004965_110--Hb_006132_090 Hb_000926_080 Hb_000926_080 Hb_004965_110--Hb_000926_080 Hb_001900_140 Hb_001900_140 Hb_004965_110--Hb_001900_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.980102 0.768441 3.8919 2.57489 0.223313 0.45785
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.22989 3.44849 3.31883 0.609493 2.31554

CAGE analysis