Hb_007590_090

Information

Type -
Description -
Location Contig7590: 52308-55409
Sequence    

Annotation

kegg
ID rcu:RCOM_0612530
description hypothetical protein
nr
ID XP_012067541.1
description PREDICTED: O-glucosyltransferase rumi [Jatropha curcas]
swissprot
ID Q29AU6
description O-glucosyltransferase rumi OS=Drosophila pseudoobscura pseudoobscura GN=rumi PE=3 SV=1
trembl
ID A0A067LDK6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08464 PE=4 SV=1
Gene Ontology
ID GO:0016740
description o-glucosyltransferase rumi

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57173: 52335-54447
cDNA
(Sanger)
(ID:Location)		 033_N22.ab1: 52336-53173

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007590_090 0.0 - - PREDICTED: O-glucosyltransferase rumi [Jatropha curcas]
2 Hb_001817_100 0.0604516224 - - PREDICTED: deoxyhypusine hydroxylase [Jatropha curcas]
3 Hb_002615_030 0.0852576245 - - PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Populus euphratica]
4 Hb_004007_110 0.0881055335 - - PREDICTED: mitochondrial outer membrane protein porin 2-like [Jatropha curcas]
5 Hb_001998_200 0.0925914687 - - UDP-glucose 4-epimerase, putative [Ricinus communis]
6 Hb_000012_110 0.0976473162 - - hypothetical protein CICLE_v10008613mg [Citrus clementina]
7 Hb_002217_100 0.1043204796 rubber biosynthesis Gene Name: Dihydrolipoamide dehydrogenase dihydrolipoamide dehydrogenase, putative [Ricinus communis]
8 Hb_000023_310 0.108511426 - - PREDICTED: probable folate-biopterin transporter 2 [Populus euphratica]
9 Hb_001510_020 0.1146336015 - - Diaminopimelate epimerase, putative [Ricinus communis]
10 Hb_000648_050 0.1156324923 - - PREDICTED: putative methylesterase 14, chloroplastic [Jatropha curcas]
11 Hb_002486_080 0.1160332403 - - PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Jatropha curcas]
12 Hb_001975_030 0.1165254995 - - 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase, partial [Plectranthus barbatus]
13 Hb_012807_130 0.1208308439 - - PREDICTED: lactoylglutathione lyase [Jatropha curcas]
14 Hb_015057_020 0.1210446125 - - PREDICTED: E3 SUMO-protein ligase MMS21 [Jatropha curcas]
15 Hb_005016_010 0.123381736 - - AMP dependent CoA ligase, putative [Ricinus communis]
16 Hb_000110_060 0.1240762233 - - PREDICTED: uncharacterized protein LOC105636258 [Jatropha curcas]
17 Hb_003371_070 0.1243003177 - - PREDICTED: citrate synthase, mitochondrial [Jatropha curcas]
18 Hb_180378_010 0.1306134407 - - PREDICTED: 4-alpha-glucanotransferase, chloroplastic/amyloplastic [Populus euphratica]
19 Hb_000110_050 0.1307016663 - - -
20 Hb_177215_030 0.1307341244 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Hevea brasiliensis]

Gene co-expression network

sample Hb_007590_090 Hb_007590_090 Hb_001817_100 Hb_001817_100 Hb_007590_090--Hb_001817_100 Hb_002615_030 Hb_002615_030 Hb_007590_090--Hb_002615_030 Hb_004007_110 Hb_004007_110 Hb_007590_090--Hb_004007_110 Hb_001998_200 Hb_001998_200 Hb_007590_090--Hb_001998_200 Hb_000012_110 Hb_000012_110 Hb_007590_090--Hb_000012_110 Hb_002217_100 Hb_002217_100 Hb_007590_090--Hb_002217_100 Hb_001817_100--Hb_002217_100 Hb_001817_100--Hb_002615_030 Hb_000023_310 Hb_000023_310 Hb_001817_100--Hb_000023_310 Hb_002007_320 Hb_002007_320 Hb_001817_100--Hb_002007_320 Hb_001817_100--Hb_001998_200 Hb_002615_030--Hb_000023_310 Hb_005016_010 Hb_005016_010 Hb_002615_030--Hb_005016_010 Hb_000599_210 Hb_000599_210 Hb_002615_030--Hb_000599_210 Hb_000110_060 Hb_000110_060 Hb_002615_030--Hb_000110_060 Hb_000365_010 Hb_000365_010 Hb_002615_030--Hb_000365_010 Hb_004007_110--Hb_000012_110 Hb_002110_100 Hb_002110_100 Hb_004007_110--Hb_002110_100 Hb_004158_020 Hb_004158_020 Hb_004007_110--Hb_004158_020 Hb_028049_010 Hb_028049_010 Hb_004007_110--Hb_028049_010 Hb_012305_130 Hb_012305_130 Hb_004007_110--Hb_012305_130 Hb_001998_200--Hb_000012_110 Hb_001998_200--Hb_004007_110 Hb_001998_200--Hb_002615_030 Hb_003602_060 Hb_003602_060 Hb_001998_200--Hb_003602_060 Hb_000012_110--Hb_002615_030 Hb_000012_110--Hb_003602_060 Hb_015057_020 Hb_015057_020 Hb_000012_110--Hb_015057_020 Hb_002217_100--Hb_002615_030 Hb_001016_100 Hb_001016_100 Hb_002217_100--Hb_001016_100 Hb_002045_060 Hb_002045_060 Hb_002217_100--Hb_002045_060 Hb_000964_030 Hb_000964_030 Hb_002217_100--Hb_000964_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.342601 1.84336 2.76827 4.86706 0.20096 0.37177
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.9535 2.55157 2.11189 3.27082 3.01323

CAGE analysis