Hb_000803_160

Information

Type -
Description -
Location Contig803: 218155-218604
Sequence    

Annotation

kegg
ID rcu:RCOM_1578770
description hypothetical protein
nr
ID KDP22124.1
description hypothetical protein JCGZ_25955 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JRH2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25955 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58898: 218130-219319 , PASA_asmbl_58899: 219015-223401 , PASA_asmbl_58900: 219015-223401
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000803_160 0.0 - - hypothetical protein JCGZ_25955 [Jatropha curcas]
2 Hb_002762_030 0.2234357051 - - hypothetical protein POPTR_0019s12370g, partial [Populus trichocarpa]
3 Hb_010642_020 0.2288755174 - - NDH-dependent cyclic electron flow 1 isoform 2 [Theobroma cacao]
4 Hb_140465_010 0.2318112971 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
5 Hb_002759_080 0.2475059653 - - PREDICTED: uncharacterized protein LOC105649846 [Jatropha curcas]
6 Hb_140360_010 0.2662305237 - - PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Populus euphratica]
7 Hb_000637_070 0.2685659912 - - PREDICTED: uncharacterized protein LOC105650668 [Jatropha curcas]
8 Hb_050514_020 0.2719460715 - - PREDICTED: abscisic acid receptor PYL4 [Jatropha curcas]
9 Hb_000067_040 0.2745573903 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
10 Hb_033312_120 0.2759426318 - - PREDICTED: psbQ-like protein 3, chloroplastic [Jatropha curcas]
11 Hb_001366_350 0.2774191556 - - PREDICTED: peptidyl-prolyl cis-trans isomerase isoform X2 [Jatropha curcas]
12 Hb_002435_090 0.27941597 - - PREDICTED: membrane-associated 30 kDa protein, chloroplastic [Jatropha curcas]
13 Hb_003470_100 0.2866156881 - - protein binding protein, putative [Ricinus communis]
14 Hb_004007_170 0.2877452697 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
15 Hb_001519_170 0.2891245597 - - PREDICTED: K(+) efflux antiporter 3, chloroplastic [Jatropha curcas]
16 Hb_005194_040 0.2892360701 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
17 Hb_005694_100 0.2901388417 - - PREDICTED: calcium-binding protein KIC-like [Populus euphratica]
18 Hb_188739_010 0.2906826174 - - protein binding protein, putative [Ricinus communis]
19 Hb_000479_340 0.2914867013 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
20 Hb_001552_070 0.2938972954 - - EXS family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_000803_160 Hb_000803_160 Hb_002762_030 Hb_002762_030 Hb_000803_160--Hb_002762_030 Hb_010642_020 Hb_010642_020 Hb_000803_160--Hb_010642_020 Hb_140465_010 Hb_140465_010 Hb_000803_160--Hb_140465_010 Hb_002759_080 Hb_002759_080 Hb_000803_160--Hb_002759_080 Hb_140360_010 Hb_140360_010 Hb_000803_160--Hb_140360_010 Hb_000637_070 Hb_000637_070 Hb_000803_160--Hb_000637_070 Hb_001552_070 Hb_001552_070 Hb_002762_030--Hb_001552_070 Hb_003905_020 Hb_003905_020 Hb_002762_030--Hb_003905_020 Hb_001969_100 Hb_001969_100 Hb_002762_030--Hb_001969_100 Hb_002307_190 Hb_002307_190 Hb_002762_030--Hb_002307_190 Hb_006916_080 Hb_006916_080 Hb_002762_030--Hb_006916_080 Hb_000067_040 Hb_000067_040 Hb_010642_020--Hb_000067_040 Hb_031862_160 Hb_031862_160 Hb_010642_020--Hb_031862_160 Hb_011900_030 Hb_011900_030 Hb_010642_020--Hb_011900_030 Hb_007761_040 Hb_007761_040 Hb_010642_020--Hb_007761_040 Hb_002571_110 Hb_002571_110 Hb_010642_020--Hb_002571_110 Hb_000479_340 Hb_000479_340 Hb_010642_020--Hb_000479_340 Hb_137862_010 Hb_137862_010 Hb_140465_010--Hb_137862_010 Hb_006970_040 Hb_006970_040 Hb_140465_010--Hb_006970_040 Hb_033312_120 Hb_033312_120 Hb_140465_010--Hb_033312_120 Hb_001021_020 Hb_001021_020 Hb_140465_010--Hb_001021_020 Hb_000189_460 Hb_000189_460 Hb_140465_010--Hb_000189_460 Hb_000302_230 Hb_000302_230 Hb_002759_080--Hb_000302_230 Hb_000123_360 Hb_000123_360 Hb_002759_080--Hb_000123_360 Hb_002759_080--Hb_003905_020 Hb_002759_080--Hb_033312_120 Hb_000638_220 Hb_000638_220 Hb_002759_080--Hb_000638_220 Hb_000120_490 Hb_000120_490 Hb_002759_080--Hb_000120_490 Hb_001519_170 Hb_001519_170 Hb_140360_010--Hb_001519_170 Hb_002435_090 Hb_002435_090 Hb_140360_010--Hb_002435_090 Hb_000574_470 Hb_000574_470 Hb_140360_010--Hb_000574_470 Hb_172632_060 Hb_172632_060 Hb_140360_010--Hb_172632_060 Hb_001711_060 Hb_001711_060 Hb_140360_010--Hb_001711_060 Hb_001366_350 Hb_001366_350 Hb_140360_010--Hb_001366_350 Hb_000934_260 Hb_000934_260 Hb_000637_070--Hb_000934_260 Hb_001999_260 Hb_001999_260 Hb_000637_070--Hb_001999_260 Hb_004208_090 Hb_004208_090 Hb_000637_070--Hb_004208_090 Hb_001975_050 Hb_001975_050 Hb_000637_070--Hb_001975_050 Hb_050514_020 Hb_050514_020 Hb_000637_070--Hb_050514_020 Hb_003470_100 Hb_003470_100 Hb_000637_070--Hb_003470_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0879638 0.214254 1.35673 0 0.0641978 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.160516 0.126082 0 0 0.689014

CAGE analysis