Hb_000574_470

Information

Type -
Description -
Location Contig574: 404259-414780
Sequence    

Annotation

kegg
ID tcc:TCM_027249
description Molecular chaperone Hsp40/DnaJ family protein isoform 1
nr
ID XP_012073151.1
description PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X1 [Jatropha curcas]
swissprot
ID B7KEJ8
description Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1
trembl
ID A0A067KYY6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06120 PE=3 SV=1
Gene Ontology
ID GO:0009535
description molecular chaperone hsp40 family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49599: 404376-409707
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000574_470 0.0 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial isoform X1 [Jatropha curcas]
2 Hb_172632_060 0.0461448435 - - PREDICTED: uncharacterized protein LOC105646135 isoform X1 [Jatropha curcas]
3 Hb_011476_030 0.0950539269 - - PREDICTED: uncharacterized protein LOC105632352 [Jatropha curcas]
4 Hb_003376_390 0.1042133801 - - PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Jatropha curcas]
5 Hb_005618_080 0.104937135 - - PREDICTED: protoporphyrinogen oxidase 1, chloroplastic [Jatropha curcas]
6 Hb_000212_250 0.1083189154 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001959_060 0.1107571956 - - PREDICTED: carboxyl-terminal-processing peptidase 2, chloroplastic [Jatropha curcas]
8 Hb_004871_010 0.1141714908 - - RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
9 Hb_140360_010 0.1190801885 - - PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Populus euphratica]
10 Hb_004117_040 0.1192281672 - - PREDICTED: uncharacterized protein LOC105638287 [Jatropha curcas]
11 Hb_007217_010 0.1196286058 - - PREDICTED: glycerol-3-phosphate acyltransferase, chloroplastic [Jatropha curcas]
12 Hb_000402_020 0.1212296679 - - PREDICTED: 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic isoform X1 [Jatropha curcas]
13 Hb_006787_090 0.1233784374 - - PREDICTED: uncharacterized protein LOC105646282 [Jatropha curcas]
14 Hb_001638_310 0.1268188682 - - ribonucleoprotein, chloroplast, putative [Ricinus communis]
15 Hb_001519_170 0.1274898248 - - PREDICTED: K(+) efflux antiporter 3, chloroplastic [Jatropha curcas]
16 Hb_001711_060 0.1288013723 - - PREDICTED: ferredoxin isoform X1 [Jatropha curcas]
17 Hb_000152_180 0.1315995374 - - PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Jatropha curcas]
18 Hb_000181_060 0.1317492172 - - PREDICTED: 30S ribosomal protein S20, chloroplastic [Jatropha curcas]
19 Hb_002986_090 0.1332133053 - - PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial [Jatropha curcas]
20 Hb_000056_310 0.1342245976 - - PREDICTED: uncharacterized protein LOC105630433 [Jatropha curcas]

Gene co-expression network

sample Hb_000574_470 Hb_000574_470 Hb_172632_060 Hb_172632_060 Hb_000574_470--Hb_172632_060 Hb_011476_030 Hb_011476_030 Hb_000574_470--Hb_011476_030 Hb_003376_390 Hb_003376_390 Hb_000574_470--Hb_003376_390 Hb_005618_080 Hb_005618_080 Hb_000574_470--Hb_005618_080 Hb_000212_250 Hb_000212_250 Hb_000574_470--Hb_000212_250 Hb_001959_060 Hb_001959_060 Hb_000574_470--Hb_001959_060 Hb_172632_060--Hb_003376_390 Hb_172632_060--Hb_001959_060 Hb_172632_060--Hb_005618_080 Hb_004871_010 Hb_004871_010 Hb_172632_060--Hb_004871_010 Hb_004117_040 Hb_004117_040 Hb_172632_060--Hb_004117_040 Hb_007217_010 Hb_007217_010 Hb_011476_030--Hb_007217_010 Hb_011476_030--Hb_000212_250 Hb_027445_100 Hb_027445_100 Hb_011476_030--Hb_027445_100 Hb_002915_010 Hb_002915_010 Hb_011476_030--Hb_002915_010 Hb_005665_090 Hb_005665_090 Hb_011476_030--Hb_005665_090 Hb_003376_390--Hb_004871_010 Hb_002928_030 Hb_002928_030 Hb_003376_390--Hb_002928_030 Hb_001649_030 Hb_001649_030 Hb_003376_390--Hb_001649_030 Hb_000358_040 Hb_000358_040 Hb_003376_390--Hb_000358_040 Hb_005618_080--Hb_001959_060 Hb_000402_020 Hb_000402_020 Hb_005618_080--Hb_000402_020 Hb_005116_100 Hb_005116_100 Hb_005618_080--Hb_005116_100 Hb_000056_310 Hb_000056_310 Hb_005618_080--Hb_000056_310 Hb_006829_080 Hb_006829_080 Hb_005618_080--Hb_006829_080 Hb_000212_250--Hb_007217_010 Hb_004517_030 Hb_004517_030 Hb_000212_250--Hb_004517_030 Hb_153553_040 Hb_153553_040 Hb_000212_250--Hb_153553_040 Hb_000392_450 Hb_000392_450 Hb_000212_250--Hb_000392_450 Hb_000212_250--Hb_005665_090 Hb_001959_060--Hb_006829_080 Hb_000684_430 Hb_000684_430 Hb_001959_060--Hb_000684_430 Hb_148146_010 Hb_148146_010 Hb_001959_060--Hb_148146_010 Hb_189003_060 Hb_189003_060 Hb_001959_060--Hb_189003_060 Hb_001959_060--Hb_000402_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.29461 3.87391 19.3767 3.34319 2.97372 2.10107
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.51928 3.93678 1.28224 2.47998 14.2951

CAGE analysis