Hb_005665_090

Information

Type -
Description -
Location Contig5665: 43026-56809
Sequence    

Annotation

kegg
ID pop:POPTR_0009s07790g
description POPTRDRAFT_557657, POPTRDRAFT_821351; hypothetical protein
nr
ID XP_012079097.1
description PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase isoform X2 [Jatropha curcas]
swissprot
ID Q9MB58
description 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase OS=Arabidopsis thaliana GN=FKFBP PE=1 SV=1
trembl
ID A0A067LBN3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17394 PE=4 SV=1
Gene Ontology
ID GO:0005829
description 6-phosphofructo-2-kinase fructose- -bisphosphatase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49082: 43097-56806 , PASA_asmbl_49083: 46157-50591 , PASA_asmbl_49084: 50627-56734
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005665_090 0.0 - - PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase isoform X2 [Jatropha curcas]
2 Hb_012779_080 0.0518747735 - - PREDICTED: carbon catabolite repressor protein 4 homolog 3 isoform X3 [Jatropha curcas]
3 Hb_009288_040 0.0717073985 - - PREDICTED: uncharacterized protein LOC105648677 [Jatropha curcas]
4 Hb_001623_490 0.0792802075 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]
5 Hb_000320_190 0.082399226 - - PREDICTED: aminomethyltransferase, mitochondrial [Jatropha curcas]
6 Hb_000645_180 0.0831025011 rubber biosynthesis Gene Name: Dihydrolipoamide dehydrogenase Lipoamide dehydrogenase 1 isoform 1 [Theobroma cacao]
7 Hb_010620_050 0.0841803386 - - PREDICTED: uncharacterized protein LOC105646119 [Jatropha curcas]
8 Hb_003752_090 0.0858644262 - - chitinase, putative [Ricinus communis]
9 Hb_000029_400 0.0870739241 - - PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 isoform X1 [Jatropha curcas]
10 Hb_000094_100 0.0882513637 - - PREDICTED: probable methyltransferase PMT28 [Jatropha curcas]
11 Hb_003687_080 0.0887041102 - - PREDICTED: casein kinase I-like [Jatropha curcas]
12 Hb_002915_010 0.0900963981 - - PREDICTED: transcriptional activator DEMETER isoform X1 [Jatropha curcas]
13 Hb_001009_140 0.0940004327 - - hypothetical protein JCGZ_11337 [Jatropha curcas]
14 Hb_070624_010 0.0957001026 - - PREDICTED: reticulocalbin-2 [Jatropha curcas]
15 Hb_138585_030 0.0970310516 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
16 Hb_008375_030 0.0970855701 - - PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X1 [Populus euphratica]
17 Hb_160271_010 0.0973560555 - - PREDICTED: FAD synthase-like isoform X2 [Jatropha curcas]
18 Hb_000318_220 0.098172225 - - conserved hypothetical protein [Ricinus communis]
19 Hb_021596_020 0.0984970187 - - hypothetical protein JCGZ_02034 [Jatropha curcas]
20 Hb_003994_080 0.0984977976 - - PREDICTED: uncharacterized protein LOC105634384 [Jatropha curcas]

Gene co-expression network

sample Hb_005665_090 Hb_005665_090 Hb_012779_080 Hb_012779_080 Hb_005665_090--Hb_012779_080 Hb_009288_040 Hb_009288_040 Hb_005665_090--Hb_009288_040 Hb_001623_490 Hb_001623_490 Hb_005665_090--Hb_001623_490 Hb_000320_190 Hb_000320_190 Hb_005665_090--Hb_000320_190 Hb_000645_180 Hb_000645_180 Hb_005665_090--Hb_000645_180 Hb_010620_050 Hb_010620_050 Hb_005665_090--Hb_010620_050 Hb_012779_080--Hb_000320_190 Hb_012779_080--Hb_001623_490 Hb_002915_010 Hb_002915_010 Hb_012779_080--Hb_002915_010 Hb_012779_080--Hb_010620_050 Hb_012779_080--Hb_009288_040 Hb_003752_090 Hb_003752_090 Hb_009288_040--Hb_003752_090 Hb_009288_040--Hb_010620_050 Hb_000094_100 Hb_000094_100 Hb_009288_040--Hb_000094_100 Hb_000465_440 Hb_000465_440 Hb_009288_040--Hb_000465_440 Hb_000327_330 Hb_000327_330 Hb_001623_490--Hb_000327_330 Hb_002026_090 Hb_002026_090 Hb_001623_490--Hb_002026_090 Hb_002218_020 Hb_002218_020 Hb_001623_490--Hb_002218_020 Hb_016448_010 Hb_016448_010 Hb_001623_490--Hb_016448_010 Hb_160271_010 Hb_160271_010 Hb_000320_190--Hb_160271_010 Hb_000320_190--Hb_002915_010 Hb_001396_020 Hb_001396_020 Hb_000320_190--Hb_001396_020 Hb_000320_190--Hb_000645_180 Hb_068079_010 Hb_068079_010 Hb_000645_180--Hb_068079_010 Hb_022693_130 Hb_022693_130 Hb_000645_180--Hb_022693_130 Hb_000645_180--Hb_012779_080 Hb_000108_020 Hb_000108_020 Hb_000645_180--Hb_000108_020 Hb_070624_010 Hb_070624_010 Hb_000645_180--Hb_070624_010 Hb_002107_050 Hb_002107_050 Hb_010620_050--Hb_002107_050 Hb_003071_030 Hb_003071_030 Hb_010620_050--Hb_003071_030 Hb_010620_050--Hb_160271_010 Hb_138585_030 Hb_138585_030 Hb_010620_050--Hb_138585_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.72391 13.7624 51.1492 27.4273 7.13167 7.95563
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.68903 9.30118 6.63416 13.2867 36.7451

CAGE analysis