Hb_140465_010

Information

Type -
Description -
Location Contig140465: 207-733
Sequence    

Annotation

kegg
ID rcu:RCOM_0393610
description hypothetical protein
nr
ID XP_012092467.1
description PREDICTED: MLP-like protein 423 [Jatropha curcas]
swissprot
ID Q93VR4
description MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=2 SV=1
trembl
ID A0A067JMT2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21786 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_140465_010 0.0 - - PREDICTED: MLP-like protein 423 [Jatropha curcas]
2 Hb_137862_010 0.2051649533 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
3 Hb_006970_040 0.2081101288 - - PREDICTED: uncharacterized protein LOC105650489 [Jatropha curcas]
4 Hb_033312_120 0.215095148 - - PREDICTED: psbQ-like protein 3, chloroplastic [Jatropha curcas]
5 Hb_000803_160 0.2318112971 - - hypothetical protein JCGZ_25955 [Jatropha curcas]
6 Hb_001021_020 0.2337819274 - - hypothetical protein JCGZ_13899 [Jatropha curcas]
7 Hb_000189_460 0.235273872 - - -
8 Hb_008887_030 0.2353183621 - - PREDICTED: uncharacterized protein LOC105650448 [Jatropha curcas]
9 Hb_002301_330 0.2429652053 - - PREDICTED: late embryogenesis abundant protein, group 3-like [Jatropha curcas]
10 Hb_002977_020 0.2456658676 - - PREDICTED: glycine-rich cell wall structural protein 1.8-like [Nelumbo nucifera]
11 Hb_000152_750 0.2466287638 - - peroxisomal biogenesis factor, putative [Ricinus communis]
12 Hb_005694_100 0.2576636337 - - PREDICTED: calcium-binding protein KIC-like [Populus euphratica]
13 Hb_145331_010 0.2610466089 transcription factor TF Family: NAC hypothetical protein POPTR_0016s07690g [Populus trichocarpa]
14 Hb_011900_030 0.261949131 - - hypothetical protein JCGZ_13686 [Jatropha curcas]
15 Hb_185274_030 0.2620071315 - - hypothetical protein JCGZ_15170 [Jatropha curcas]
16 Hb_004176_090 0.2747846861 - - Nuc-1 negative regulatory protein preg, putative [Ricinus communis]
17 Hb_011930_060 0.2781434247 - - nitrate transporter, putative [Ricinus communis]
18 Hb_000834_170 0.2795438155 - - polygalacturonase, putative [Ricinus communis]
19 Hb_002762_030 0.2802663879 - - hypothetical protein POPTR_0019s12370g, partial [Populus trichocarpa]
20 Hb_000479_340 0.2805673387 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]

Gene co-expression network

sample Hb_140465_010 Hb_140465_010 Hb_137862_010 Hb_137862_010 Hb_140465_010--Hb_137862_010 Hb_006970_040 Hb_006970_040 Hb_140465_010--Hb_006970_040 Hb_033312_120 Hb_033312_120 Hb_140465_010--Hb_033312_120 Hb_000803_160 Hb_000803_160 Hb_140465_010--Hb_000803_160 Hb_001021_020 Hb_001021_020 Hb_140465_010--Hb_001021_020 Hb_000189_460 Hb_000189_460 Hb_140465_010--Hb_000189_460 Hb_000152_750 Hb_000152_750 Hb_137862_010--Hb_000152_750 Hb_137862_010--Hb_006970_040 Hb_000731_120 Hb_000731_120 Hb_137862_010--Hb_000731_120 Hb_002641_020 Hb_002641_020 Hb_137862_010--Hb_002641_020 Hb_001242_030 Hb_001242_030 Hb_137862_010--Hb_001242_030 Hb_006970_040--Hb_000152_750 Hb_001546_170 Hb_001546_170 Hb_006970_040--Hb_001546_170 Hb_011930_060 Hb_011930_060 Hb_006970_040--Hb_011930_060 Hb_006970_040--Hb_002641_020 Hb_000227_180 Hb_000227_180 Hb_006970_040--Hb_000227_180 Hb_002027_100 Hb_002027_100 Hb_033312_120--Hb_002027_100 Hb_002025_220 Hb_002025_220 Hb_033312_120--Hb_002025_220 Hb_061126_010 Hb_061126_010 Hb_033312_120--Hb_061126_010 Hb_000483_470 Hb_000483_470 Hb_033312_120--Hb_000483_470 Hb_023904_010 Hb_023904_010 Hb_033312_120--Hb_023904_010 Hb_005305_140 Hb_005305_140 Hb_033312_120--Hb_005305_140 Hb_002762_030 Hb_002762_030 Hb_000803_160--Hb_002762_030 Hb_010642_020 Hb_010642_020 Hb_000803_160--Hb_010642_020 Hb_002759_080 Hb_002759_080 Hb_000803_160--Hb_002759_080 Hb_140360_010 Hb_140360_010 Hb_000803_160--Hb_140360_010 Hb_000637_070 Hb_000637_070 Hb_000803_160--Hb_000637_070 Hb_001021_020--Hb_000189_460 Hb_002977_020 Hb_002977_020 Hb_001021_020--Hb_002977_020 Hb_145331_010 Hb_145331_010 Hb_001021_020--Hb_145331_010 Hb_001021_020--Hb_001242_030 Hb_011900_030 Hb_011900_030 Hb_001021_020--Hb_011900_030 Hb_001021_020--Hb_011930_060 Hb_000189_460--Hb_002977_020 Hb_000189_460--Hb_011900_030 Hb_000189_460--Hb_001242_030 Hb_000189_460--Hb_011930_060 Hb_000189_460--Hb_145331_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0821559 0.303121 1.0112 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.152853 0 0 0.809316

CAGE analysis