Hb_061126_010

Information

Type -
Description -
Location Contig61126: 869-3389
Sequence    

Annotation

kegg
ID rcu:RCOM_0901420
description hypothetical protein
nr
ID XP_012073132.1
description PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KLN2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06108 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061126_010 0.0 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
2 Hb_000697_020 0.0569100949 - - Zinc-binding dehydrogenase family protein isoform 1 [Theobroma cacao]
3 Hb_000120_490 0.0958631612 - - PREDICTED: MORC family CW-type zinc finger protein 3-like [Jatropha curcas]
4 Hb_000705_010 0.0989619897 - - hypothetical protein CICLE_v10027296mg [Citrus clementina]
5 Hb_063405_010 0.1028018245 - - PREDICTED: probable terpene synthase 3 [Jatropha curcas]
6 Hb_002010_030 0.1028696331 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
7 Hb_001172_150 0.1036068638 desease resistance Gene Name: ABC_membrane PREDICTED: putative ABC transporter C family member 15 [Jatropha curcas]
8 Hb_000483_470 0.109344387 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like isoform X1 [Jatropha curcas]
9 Hb_003337_020 0.111242863 - - PREDICTED: uncharacterized protein LOC105116455 [Populus euphratica]
10 Hb_000212_270 0.1151703674 - - calreticulin, putative [Ricinus communis]
11 Hb_016687_010 0.1152572781 - - PREDICTED: uncharacterized protein LOC105637401 [Jatropha curcas]
12 Hb_000345_400 0.117678423 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003777_090 0.1211364336 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
14 Hb_003373_050 0.1220985903 - - receptor protein kinase zmpk1, putative [Ricinus communis]
15 Hb_001953_110 0.1235482891 - - PREDICTED: protein TAPETUM DETERMINANT 1-like [Jatropha curcas]
16 Hb_004109_270 0.124466324 transcription factor TF Family: NAC transcription activator NAC1 family protein [Populus trichocarpa]
17 Hb_023904_010 0.1255079001 - - -
18 Hb_008878_020 0.1268822148 - - PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Populus euphratica]
19 Hb_006106_010 0.1273779282 transcription factor TF Family: TCP transcription factor, putative [Ricinus communis]
20 Hb_010584_020 0.1278965526 - - PREDICTED: probable polygalacturonase [Jatropha curcas]

Gene co-expression network

sample Hb_061126_010 Hb_061126_010 Hb_000697_020 Hb_000697_020 Hb_061126_010--Hb_000697_020 Hb_000120_490 Hb_000120_490 Hb_061126_010--Hb_000120_490 Hb_000705_010 Hb_000705_010 Hb_061126_010--Hb_000705_010 Hb_063405_010 Hb_063405_010 Hb_061126_010--Hb_063405_010 Hb_002010_030 Hb_002010_030 Hb_061126_010--Hb_002010_030 Hb_001172_150 Hb_001172_150 Hb_061126_010--Hb_001172_150 Hb_016687_010 Hb_016687_010 Hb_000697_020--Hb_016687_010 Hb_000697_020--Hb_001172_150 Hb_000212_270 Hb_000212_270 Hb_000697_020--Hb_000212_270 Hb_000697_020--Hb_063405_010 Hb_000697_020--Hb_000705_010 Hb_074548_010 Hb_074548_010 Hb_000120_490--Hb_074548_010 Hb_007462_020 Hb_007462_020 Hb_000120_490--Hb_007462_020 Hb_121089_010 Hb_121089_010 Hb_000120_490--Hb_121089_010 Hb_000120_490--Hb_002010_030 Hb_000120_490--Hb_000697_020 Hb_000705_010--Hb_063405_010 Hb_080922_010 Hb_080922_010 Hb_000705_010--Hb_080922_010 Hb_000270_090 Hb_000270_090 Hb_000705_010--Hb_000270_090 Hb_001321_010 Hb_001321_010 Hb_000705_010--Hb_001321_010 Hb_000705_010--Hb_002010_030 Hb_003937_010 Hb_003937_010 Hb_063405_010--Hb_003937_010 Hb_003777_090 Hb_003777_090 Hb_063405_010--Hb_003777_090 Hb_063405_010--Hb_001321_010 Hb_063405_010--Hb_000270_090 Hb_003767_060 Hb_003767_060 Hb_002010_030--Hb_003767_060 Hb_004017_030 Hb_004017_030 Hb_002010_030--Hb_004017_030 Hb_001369_340 Hb_001369_340 Hb_002010_030--Hb_001369_340 Hb_004109_140 Hb_004109_140 Hb_002010_030--Hb_004109_140 Hb_046739_010 Hb_046739_010 Hb_002010_030--Hb_046739_010 Hb_005433_020 Hb_005433_020 Hb_002010_030--Hb_005433_020 Hb_003119_130 Hb_003119_130 Hb_001172_150--Hb_003119_130 Hb_008878_020 Hb_008878_020 Hb_001172_150--Hb_008878_020 Hb_001172_150--Hb_000212_270 Hb_001172_150--Hb_000705_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.403837 7.90614 29.2939 5.50459 0.180586 0.154214
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.242948 0.143286 0 2.48737 28.788

CAGE analysis