Hb_002571_110

Information

Type -
Description -
Location Contig2571: 118896-121113
Sequence    

Annotation

kegg
ID rcu:RCOM_1014270
description triacylglycerol lipase, putative
nr
ID XP_012091743.1
description PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
swissprot
ID A2ZW16
description Phospholipase A1-II 1 OS=Oryza sativa subsp. japonica GN=Os01g0651100 PE=3 SV=2
trembl
ID A0A067JBC6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21543 PE=4 SV=1
Gene Ontology
ID GO:0016787
description phospholipase a1-iigamma-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002571_110 0.0 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
2 Hb_000084_270 0.0783660447 - - hypothetical protein POPTR_0006s22820g [Populus trichocarpa]
3 Hb_000186_020 0.0791821875 - - PREDICTED: uncharacterized protein LOC104901327 [Beta vulgaris subsp. vulgaris]
4 Hb_014870_010 0.0800350613 - - PREDICTED: uncharacterized protein LOC104891359 [Beta vulgaris subsp. vulgaris]
5 Hb_007761_040 0.0802573898 - - carbonyl reductase, putative [Ricinus communis]
6 Hb_007676_090 0.0890498499 - - PREDICTED: uncharacterized protein LOC105644038 [Jatropha curcas]
7 Hb_003428_020 0.0912260966 - - PREDICTED: uncharacterized protein LOC105140247 [Populus euphratica]
8 Hb_000037_210 0.0925917063 - - -
9 Hb_009083_060 0.0930485761 - - PREDICTED: uncharacterized protein LOC103344557 [Prunus mume]
10 Hb_001935_050 0.0943839676 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 7 [Jatropha curcas]
11 Hb_000864_040 0.1060822242 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
12 Hb_173107_010 0.1072286614 - - PREDICTED: pleiotropic drug resistance protein 1-like [Jatropha curcas]
13 Hb_000189_610 0.1091462334 - - Late embryogenesis abundant protein D-34, putative [Ricinus communis]
14 Hb_001543_010 0.1099870239 - - conserved hypothetical protein [Ricinus communis]
15 Hb_010904_020 0.1143526252 - - PREDICTED: probable receptor-like protein kinase At5g39030 [Populus euphratica]
16 Hb_124540_010 0.1160695841 - - PREDICTED: protein NRT1/ PTR FAMILY 3.1-like [Populus euphratica]
17 Hb_001085_280 0.1269659016 transcription factor TF Family: bHLH PREDICTED: transcription factor FAMA isoform X2 [Populus euphratica]
18 Hb_031862_160 0.1284815085 - - unnamed protein product [Vitis vinifera]
19 Hb_099509_010 0.1333677502 - - PREDICTED: vacuolar iron transporter 1-like isoform X2 [Jatropha curcas]
20 Hb_099335_020 0.1423427993 - - hypothetical protein ARALYDRAFT_905869 [Arabidopsis lyrata subsp. lyrata]

Gene co-expression network

sample Hb_002571_110 Hb_002571_110 Hb_000084_270 Hb_000084_270 Hb_002571_110--Hb_000084_270 Hb_000186_020 Hb_000186_020 Hb_002571_110--Hb_000186_020 Hb_014870_010 Hb_014870_010 Hb_002571_110--Hb_014870_010 Hb_007761_040 Hb_007761_040 Hb_002571_110--Hb_007761_040 Hb_007676_090 Hb_007676_090 Hb_002571_110--Hb_007676_090 Hb_003428_020 Hb_003428_020 Hb_002571_110--Hb_003428_020 Hb_000084_270--Hb_000186_020 Hb_000084_270--Hb_014870_010 Hb_000084_270--Hb_007676_090 Hb_000084_270--Hb_003428_020 Hb_000037_210 Hb_000037_210 Hb_000084_270--Hb_000037_210 Hb_009083_060 Hb_009083_060 Hb_000084_270--Hb_009083_060 Hb_000186_020--Hb_014870_010 Hb_000186_020--Hb_007676_090 Hb_000186_020--Hb_003428_020 Hb_000186_020--Hb_000037_210 Hb_000186_020--Hb_009083_060 Hb_001935_050 Hb_001935_050 Hb_014870_010--Hb_001935_050 Hb_000864_040 Hb_000864_040 Hb_014870_010--Hb_000864_040 Hb_000189_610 Hb_000189_610 Hb_014870_010--Hb_000189_610 Hb_014870_010--Hb_007676_090 Hb_011900_030 Hb_011900_030 Hb_007761_040--Hb_011900_030 Hb_007761_040--Hb_014870_010 Hb_007761_040--Hb_001935_050 Hb_007761_040--Hb_000864_040 Hb_007761_040--Hb_000084_270 Hb_007676_090--Hb_003428_020 Hb_007676_090--Hb_000037_210 Hb_007676_090--Hb_009083_060 Hb_003428_020--Hb_000037_210 Hb_003428_020--Hb_009083_060 Hb_099509_010 Hb_099509_010 Hb_003428_020--Hb_099509_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0148425 1.4516 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0128622 0.7971

CAGE analysis