Hb_014870_010

Information

Type -
Description -
Location Contig14870: 3-134
Sequence    

Annotation

kegg
ID bvg:104891359
description uncharacterized LOC104891359
nr
ID XP_010675344.1
description PREDICTED: uncharacterized protein LOC104891359 [Beta vulgaris subsp. vulgaris]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014870_010 0.0 - - PREDICTED: uncharacterized protein LOC104891359 [Beta vulgaris subsp. vulgaris]
2 Hb_000084_270 0.0226032087 - - hypothetical protein POPTR_0006s22820g [Populus trichocarpa]
3 Hb_000186_020 0.0297821165 - - PREDICTED: uncharacterized protein LOC104901327 [Beta vulgaris subsp. vulgaris]
4 Hb_001935_050 0.0358705485 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 7 [Jatropha curcas]
5 Hb_000864_040 0.0547663357 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
6 Hb_000189_610 0.0592439314 - - Late embryogenesis abundant protein D-34, putative [Ricinus communis]
7 Hb_007676_090 0.0599329872 - - PREDICTED: uncharacterized protein LOC105644038 [Jatropha curcas]
8 Hb_001543_010 0.0604488364 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003428_020 0.0643188737 - - PREDICTED: uncharacterized protein LOC105140247 [Populus euphratica]
10 Hb_010904_020 0.0665635815 - - PREDICTED: probable receptor-like protein kinase At5g39030 [Populus euphratica]
11 Hb_000037_210 0.0669223944 - - -
12 Hb_009083_060 0.067771732 - - PREDICTED: uncharacterized protein LOC103344557 [Prunus mume]
13 Hb_124540_010 0.0689107884 - - PREDICTED: protein NRT1/ PTR FAMILY 3.1-like [Populus euphratica]
14 Hb_002571_110 0.0800350613 - - PREDICTED: phospholipase A1-II 1-like [Jatropha curcas]
15 Hb_099335_020 0.1022141895 - - hypothetical protein ARALYDRAFT_905869 [Arabidopsis lyrata subsp. lyrata]
16 Hb_000032_120 0.1038728722 - - Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Glycine soja]
17 Hb_001068_060 0.1041409466 - - PREDICTED: uncharacterized protein LOC105641067 [Jatropha curcas]
18 Hb_000877_010 0.1067686644 - - PREDICTED: F-box protein At3g07870-like [Jatropha curcas]
19 Hb_007761_040 0.1168808859 - - carbonyl reductase, putative [Ricinus communis]
20 Hb_099509_010 0.1254513181 - - PREDICTED: vacuolar iron transporter 1-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_014870_010 Hb_014870_010 Hb_000084_270 Hb_000084_270 Hb_014870_010--Hb_000084_270 Hb_000186_020 Hb_000186_020 Hb_014870_010--Hb_000186_020 Hb_001935_050 Hb_001935_050 Hb_014870_010--Hb_001935_050 Hb_000864_040 Hb_000864_040 Hb_014870_010--Hb_000864_040 Hb_000189_610 Hb_000189_610 Hb_014870_010--Hb_000189_610 Hb_007676_090 Hb_007676_090 Hb_014870_010--Hb_007676_090 Hb_000084_270--Hb_000186_020 Hb_000084_270--Hb_007676_090 Hb_003428_020 Hb_003428_020 Hb_000084_270--Hb_003428_020 Hb_000037_210 Hb_000037_210 Hb_000084_270--Hb_000037_210 Hb_009083_060 Hb_009083_060 Hb_000084_270--Hb_009083_060 Hb_000186_020--Hb_007676_090 Hb_000186_020--Hb_003428_020 Hb_000186_020--Hb_000037_210 Hb_000186_020--Hb_009083_060 Hb_001935_050--Hb_000864_040 Hb_001935_050--Hb_000189_610 Hb_001543_010 Hb_001543_010 Hb_001935_050--Hb_001543_010 Hb_010904_020 Hb_010904_020 Hb_001935_050--Hb_010904_020 Hb_124540_010 Hb_124540_010 Hb_001935_050--Hb_124540_010 Hb_000864_040--Hb_000189_610 Hb_000864_040--Hb_001543_010 Hb_000864_040--Hb_010904_020 Hb_000864_040--Hb_124540_010 Hb_099335_020 Hb_099335_020 Hb_000864_040--Hb_099335_020 Hb_000189_610--Hb_001543_010 Hb_000189_610--Hb_010904_020 Hb_000189_610--Hb_124540_010 Hb_000189_610--Hb_099335_020 Hb_007676_090--Hb_003428_020 Hb_007676_090--Hb_000037_210 Hb_007676_090--Hb_009083_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 154.985 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 92.5732

CAGE analysis