Hb_000186_310

Information

Type -
Description -
Location Contig186: 356323-363892
Sequence    

Annotation

kegg
ID rcu:RCOM_0903570
description hypothetical protein
nr
ID XP_002518429.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RXG0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0903570 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000186_310 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_006054_040 0.2427354112 - - -
3 Hb_002151_010 0.2567499814 - - hypothetical protein POPTR_0006s14610g [Populus trichocarpa]
4 Hb_000422_070 0.2674322997 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004158_050 0.270564692 - - hypothetical protein JCGZ_09026 [Jatropha curcas]
6 Hb_008725_140 0.2731798637 - - PREDICTED: kynurenine--oxoglutarate transaminase-like isoform X1 [Jatropha curcas]
7 Hb_001751_060 0.2755020797 - - PREDICTED: SEC12-like protein 1 [Jatropha curcas]
8 Hb_073973_030 0.2768149525 - - PREDICTED: uncharacterized protein LOC105638905 isoform X2 [Jatropha curcas]
9 Hb_000665_220 0.2800191303 - - catalytic, putative [Ricinus communis]
10 Hb_000120_350 0.2800940929 - - PREDICTED: uncharacterized protein LOC104422872 isoform X1 [Eucalyptus grandis]
11 Hb_002026_090 0.2819671924 - - PREDICTED: ubiquitin-conjugating enzyme E2 4-like [Jatropha curcas]
12 Hb_084230_010 0.2857548769 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X4 [Jatropha curcas]
13 Hb_000656_050 0.2885689287 - - PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera]
14 Hb_000300_710 0.2890136409 - - PREDICTED: uncharacterized protein LOC105123549 [Populus euphratica]
15 Hb_007113_080 0.2903352594 - - PREDICTED: uncharacterized protein LOC105639553 isoform X1 [Jatropha curcas]
16 Hb_002900_150 0.2922396979 - - PREDICTED: syntaxin-81 [Jatropha curcas]
17 Hb_000984_220 0.293301045 - - PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Populus euphratica]
18 Hb_005690_030 0.2957879365 - - hypothetical protein VITISV_020378 [Vitis vinifera]
19 Hb_005656_070 0.2967447796 - - PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Jatropha curcas]
20 Hb_001950_070 0.2967793509 - - cyclin d, putative [Ricinus communis]

Gene co-expression network

sample Hb_000186_310 Hb_000186_310 Hb_006054_040 Hb_006054_040 Hb_000186_310--Hb_006054_040 Hb_002151_010 Hb_002151_010 Hb_000186_310--Hb_002151_010 Hb_000422_070 Hb_000422_070 Hb_000186_310--Hb_000422_070 Hb_004158_050 Hb_004158_050 Hb_000186_310--Hb_004158_050 Hb_008725_140 Hb_008725_140 Hb_000186_310--Hb_008725_140 Hb_001751_060 Hb_001751_060 Hb_000186_310--Hb_001751_060 Hb_000085_010 Hb_000085_010 Hb_006054_040--Hb_000085_010 Hb_145745_040 Hb_145745_040 Hb_006054_040--Hb_145745_040 Hb_003388_070 Hb_003388_070 Hb_006054_040--Hb_003388_070 Hb_088080_020 Hb_088080_020 Hb_006054_040--Hb_088080_020 Hb_115823_010 Hb_115823_010 Hb_006054_040--Hb_115823_010 Hb_002151_010--Hb_004158_050 Hb_000120_350 Hb_000120_350 Hb_002151_010--Hb_000120_350 Hb_002900_150 Hb_002900_150 Hb_002151_010--Hb_002900_150 Hb_004324_210 Hb_004324_210 Hb_002151_010--Hb_004324_210 Hb_004907_090 Hb_004907_090 Hb_002151_010--Hb_004907_090 Hb_000984_220 Hb_000984_220 Hb_002151_010--Hb_000984_220 Hb_004545_180 Hb_004545_180 Hb_000422_070--Hb_004545_180 Hb_001221_190 Hb_001221_190 Hb_000422_070--Hb_001221_190 Hb_001221_200 Hb_001221_200 Hb_000422_070--Hb_001221_200 Hb_009838_020 Hb_009838_020 Hb_000422_070--Hb_009838_020 Hb_001386_010 Hb_001386_010 Hb_000422_070--Hb_001386_010 Hb_000094_030 Hb_000094_030 Hb_000422_070--Hb_000094_030 Hb_002026_090 Hb_002026_090 Hb_004158_050--Hb_002026_090 Hb_000327_330 Hb_000327_330 Hb_004158_050--Hb_000327_330 Hb_001623_490 Hb_001623_490 Hb_004158_050--Hb_001623_490 Hb_003687_080 Hb_003687_080 Hb_004158_050--Hb_003687_080 Hb_007594_080 Hb_007594_080 Hb_004158_050--Hb_007594_080 Hb_001160_110 Hb_001160_110 Hb_004158_050--Hb_001160_110 Hb_002249_040 Hb_002249_040 Hb_008725_140--Hb_002249_040 Hb_002265_010 Hb_002265_010 Hb_008725_140--Hb_002265_010 Hb_000424_070 Hb_000424_070 Hb_008725_140--Hb_000424_070 Hb_000538_260 Hb_000538_260 Hb_008725_140--Hb_000538_260 Hb_011609_010 Hb_011609_010 Hb_008725_140--Hb_011609_010 Hb_006618_070 Hb_006618_070 Hb_008725_140--Hb_006618_070 Hb_012180_060 Hb_012180_060 Hb_001751_060--Hb_012180_060 Hb_002498_300 Hb_002498_300 Hb_001751_060--Hb_002498_300 Hb_000076_250 Hb_000076_250 Hb_001751_060--Hb_000076_250 Hb_005000_060 Hb_005000_060 Hb_001751_060--Hb_005000_060 Hb_000169_070 Hb_000169_070 Hb_001751_060--Hb_000169_070 Hb_001386_090 Hb_001386_090 Hb_001751_060--Hb_001386_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0197491 0.0526254 0.228162 0.0817727 0.0185067 0.154315
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0710481 0 0.0142556 0.0731322

CAGE analysis