Hb_115823_010

Information

Type -
Description -
Location Contig115823: 74-370
Sequence    

Annotation

kegg
ID rcu:RCOM_1078510
description hypothetical protein
nr
ID XP_002514850.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RM81
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1078510 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_115823_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_007904_050 0.1161199275 - - hypothetical protein JCGZ_17883 [Jatropha curcas]
3 Hb_003894_090 0.1286816245 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005181_020 0.2011145971 - - Pectinesterase-2 precursor, putative [Ricinus communis]
5 Hb_002942_170 0.2087365811 - - acyl carrier protein, putative [Ricinus communis]
6 Hb_022425_020 0.2169891329 - - -
7 Hb_141199_010 0.2176253672 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
8 Hb_173638_010 0.2295769133 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
9 Hb_002108_020 0.2391254894 - - hypothetical protein JCGZ_16012 [Jatropha curcas]
10 Hb_004907_040 0.2497597856 - - hypothetical protein POPTR_0011s079751g, partial [Populus trichocarpa]
11 Hb_012539_090 0.258753136 - - PREDICTED: LOW QUALITY PROTEIN: U-box domain-containing protein 26, partial [Eucalyptus grandis]
12 Hb_002636_140 0.2662275123 - - PREDICTED: GDSL esterase/lipase At1g71691-like [Populus euphratica]
13 Hb_007594_050 0.2683013897 - - ATP binding protein, putative [Ricinus communis]
14 Hb_007416_380 0.269893803 - - PREDICTED: fasciclin-like arabinogalactan protein 3 [Jatropha curcas]
15 Hb_000069_390 0.2725458502 - - PREDICTED: probable F-box protein At3g61730 [Jatropha curcas]
16 Hb_000107_670 0.2729464162 transcription factor TF Family: MIKC floral homeotic protein AGAMOUS [Jatropha curcas]
17 Hb_000134_100 0.2744154117 - - PREDICTED: putative disease resistance protein RGA1 [Prunus mume]
18 Hb_007413_020 0.2753770339 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001366_280 0.2801993842 - - PREDICTED: uncharacterized protein LOC105642732 [Jatropha curcas]
20 Hb_027402_030 0.2802524579 - - PREDICTED: probable carboxylesterase 17 [Jatropha curcas]

Gene co-expression network

sample Hb_115823_010 Hb_115823_010 Hb_007904_050 Hb_007904_050 Hb_115823_010--Hb_007904_050 Hb_003894_090 Hb_003894_090 Hb_115823_010--Hb_003894_090 Hb_005181_020 Hb_005181_020 Hb_115823_010--Hb_005181_020 Hb_002942_170 Hb_002942_170 Hb_115823_010--Hb_002942_170 Hb_022425_020 Hb_022425_020 Hb_115823_010--Hb_022425_020 Hb_141199_010 Hb_141199_010 Hb_115823_010--Hb_141199_010 Hb_007904_050--Hb_005181_020 Hb_007904_050--Hb_141199_010 Hb_007904_050--Hb_022425_020 Hb_007904_050--Hb_002942_170 Hb_173638_010 Hb_173638_010 Hb_007904_050--Hb_173638_010 Hb_003894_090--Hb_007904_050 Hb_001208_020 Hb_001208_020 Hb_003894_090--Hb_001208_020 Hb_002217_370 Hb_002217_370 Hb_003894_090--Hb_002217_370 Hb_003894_090--Hb_022425_020 Hb_053073_010 Hb_053073_010 Hb_003894_090--Hb_053073_010 Hb_005181_020--Hb_141199_010 Hb_007416_380 Hb_007416_380 Hb_005181_020--Hb_007416_380 Hb_000069_390 Hb_000069_390 Hb_005181_020--Hb_000069_390 Hb_000574_520 Hb_000574_520 Hb_005181_020--Hb_000574_520 Hb_001329_010 Hb_001329_010 Hb_002942_170--Hb_001329_010 Hb_002811_220 Hb_002811_220 Hb_002942_170--Hb_002811_220 Hb_002942_170--Hb_022425_020 Hb_002942_170--Hb_173638_010 Hb_001366_280 Hb_001366_280 Hb_002942_170--Hb_001366_280 Hb_002636_140 Hb_002636_140 Hb_022425_020--Hb_002636_140 Hb_002108_020 Hb_002108_020 Hb_022425_020--Hb_002108_020 Hb_022425_020--Hb_001366_280 Hb_012675_020 Hb_012675_020 Hb_022425_020--Hb_012675_020 Hb_009225_030 Hb_009225_030 Hb_022425_020--Hb_009225_030 Hb_141199_010--Hb_007416_380 Hb_141199_010--Hb_000069_390 Hb_141199_010--Hb_000574_520 Hb_183612_020 Hb_183612_020 Hb_141199_010--Hb_183612_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.151942 2.71748 1.79866 0 1.07693
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis