Hb_001366_280

Information

Type -
Description -
Location Contig1366: 245338-246208
Sequence    

Annotation

kegg
ID pop:POPTR_0014s10590g
description POPTRDRAFT_774599; hypothetical protein
nr
ID XP_012083046.1
description PREDICTED: uncharacterized protein LOC105642732 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K978
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14140 PE=4 SV=1
Gene Ontology
ID GO:0005634
description PREDICTED: uncharacterized protein LOC105642732

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001366_280 0.0 - - PREDICTED: uncharacterized protein LOC105642732 [Jatropha curcas]
2 Hb_046204_010 0.1208896519 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
3 Hb_007304_020 0.1342871157 - - PREDICTED: uncharacterized protein LOC100256879 [Vitis vinifera]
4 Hb_021576_050 0.1381303196 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
5 Hb_000035_230 0.1401454345 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
6 Hb_000138_120 0.1403423841 - - conserved hypothetical protein [Ricinus communis]
7 Hb_034498_010 0.1445693121 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
8 Hb_000527_020 0.1452368564 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
9 Hb_072201_010 0.1485990556 - - PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]
10 Hb_128392_010 0.1508161077 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Jatropha curcas]
11 Hb_001384_030 0.1516649795 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
12 Hb_001247_060 0.1519012771 - - zinc finger protein, putative [Ricinus communis]
13 Hb_003847_060 0.1526457517 - - syntaxin, putative [Ricinus communis]
14 Hb_033312_100 0.1564658873 - - -
15 Hb_000890_140 0.1566381804 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
16 Hb_074674_010 0.158108907 - - Cell division cycle protein cdt2, putative [Ricinus communis]
17 Hb_004092_020 0.1602210261 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 32 [Jatropha curcas]
18 Hb_002284_140 0.1602227188 - - hypothetical protein POPTR_0002s00800g [Populus trichocarpa]
19 Hb_000556_210 0.1603296111 - - hypothetical protein POPTR_0014s06640g [Populus trichocarpa]
20 Hb_109304_010 0.1604303997 - - hypothetical protein JCGZ_19971 [Jatropha curcas]

Gene co-expression network

sample Hb_001366_280 Hb_001366_280 Hb_046204_010 Hb_046204_010 Hb_001366_280--Hb_046204_010 Hb_007304_020 Hb_007304_020 Hb_001366_280--Hb_007304_020 Hb_021576_050 Hb_021576_050 Hb_001366_280--Hb_021576_050 Hb_000035_230 Hb_000035_230 Hb_001366_280--Hb_000035_230 Hb_000138_120 Hb_000138_120 Hb_001366_280--Hb_000138_120 Hb_034498_010 Hb_034498_010 Hb_001366_280--Hb_034498_010 Hb_001384_030 Hb_001384_030 Hb_046204_010--Hb_001384_030 Hb_074674_010 Hb_074674_010 Hb_046204_010--Hb_074674_010 Hb_046204_010--Hb_007304_020 Hb_033312_100 Hb_033312_100 Hb_046204_010--Hb_033312_100 Hb_000422_040 Hb_000422_040 Hb_046204_010--Hb_000422_040 Hb_046204_010--Hb_000138_120 Hb_059502_010 Hb_059502_010 Hb_007304_020--Hb_059502_010 Hb_010589_090 Hb_010589_090 Hb_007304_020--Hb_010589_090 Hb_000531_010 Hb_000531_010 Hb_007304_020--Hb_000531_010 Hb_007304_020--Hb_033312_100 Hb_001247_060 Hb_001247_060 Hb_007304_020--Hb_001247_060 Hb_128392_010 Hb_128392_010 Hb_021576_050--Hb_128392_010 Hb_000527_020 Hb_000527_020 Hb_021576_050--Hb_000527_020 Hb_003847_060 Hb_003847_060 Hb_021576_050--Hb_003847_060 Hb_021576_050--Hb_000035_230 Hb_005398_050 Hb_005398_050 Hb_021576_050--Hb_005398_050 Hb_118282_020 Hb_118282_020 Hb_021576_050--Hb_118282_020 Hb_000035_230--Hb_001247_060 Hb_000089_090 Hb_000089_090 Hb_000035_230--Hb_000089_090 Hb_000035_230--Hb_003847_060 Hb_012092_040 Hb_012092_040 Hb_000035_230--Hb_012092_040 Hb_000035_230--Hb_005398_050 Hb_000035_230--Hb_128392_010 Hb_006469_100 Hb_006469_100 Hb_000138_120--Hb_006469_100 Hb_000574_060 Hb_000574_060 Hb_000138_120--Hb_000574_060 Hb_027802_030 Hb_027802_030 Hb_000138_120--Hb_027802_030 Hb_141016_010 Hb_141016_010 Hb_000138_120--Hb_141016_010 Hb_168078_010 Hb_168078_010 Hb_000138_120--Hb_168078_010 Hb_004375_090 Hb_004375_090 Hb_000138_120--Hb_004375_090 Hb_000890_140 Hb_000890_140 Hb_034498_010--Hb_000890_140 Hb_022845_010 Hb_022845_010 Hb_034498_010--Hb_022845_010 Hb_005141_020 Hb_005141_020 Hb_034498_010--Hb_005141_020 Hb_034498_010--Hb_000527_020 Hb_001190_030 Hb_001190_030 Hb_034498_010--Hb_001190_030 Hb_001322_220 Hb_001322_220 Hb_034498_010--Hb_001322_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0719587 5.96844 4.67298 0 0.231485
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.261362 0

CAGE analysis