Hb_000890_140

Information

Type -
Description -
Location Contig890: 136866-137480
Sequence    

Annotation

kegg
ID pop:POPTR_0005s09880g
description POPTRDRAFT_1077689; hypothetical protein
nr
ID XP_012087381.1
description PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZX7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22629 PE=4 SV=1
Gene Ontology
ID GO:0009506
description PREDICTED: uncharacterized protein LOC105646185

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61608: 136913-137866
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000890_140 0.0 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
2 Hb_000527_020 0.0754686732 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
3 Hb_003368_070 0.0758628402 - - PREDICTED: uncharacterized protein LOC105109387 [Populus euphratica]
4 Hb_001699_070 0.0776406444 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000856_390 0.0823623317 - - conserved hypothetical protein [Ricinus communis]
6 Hb_007245_030 0.0823856307 - - conserved hypothetical protein [Ricinus communis]
7 Hb_034498_010 0.0868820904 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
8 Hb_005398_050 0.0900786113 - - PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas]
9 Hb_001390_040 0.0911628789 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
10 Hb_003847_060 0.0935350914 - - syntaxin, putative [Ricinus communis]
11 Hb_006573_310 0.0973189866 - - Tellurite resistance protein tehA, putative [Ricinus communis]
12 Hb_001307_150 0.0980496465 - - receptor protein kinase, putative [Ricinus communis]
13 Hb_003018_210 0.1001490905 - - PREDICTED: uncharacterized protein LOC105138721 isoform X2 [Populus euphratica]
14 Hb_004225_160 0.1009792001 - - PREDICTED: kiwellin-like [Jatropha curcas]
15 Hb_005914_100 0.1025234688 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000116_050 0.1047441093 - - PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Jatropha curcas]
17 Hb_000614_200 0.1049272009 - - plant mitotic spindle assembly checkpoint protein mad2, putative [Ricinus communis]
18 Hb_004097_030 0.1057448931 - - PREDICTED: uncharacterized protein LOC105634518 [Jatropha curcas]
19 Hb_009113_060 0.1061224173 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000480_060 0.1107007262 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]

Gene co-expression network

sample Hb_000890_140 Hb_000890_140 Hb_000527_020 Hb_000527_020 Hb_000890_140--Hb_000527_020 Hb_003368_070 Hb_003368_070 Hb_000890_140--Hb_003368_070 Hb_001699_070 Hb_001699_070 Hb_000890_140--Hb_001699_070 Hb_000856_390 Hb_000856_390 Hb_000890_140--Hb_000856_390 Hb_007245_030 Hb_007245_030 Hb_000890_140--Hb_007245_030 Hb_034498_010 Hb_034498_010 Hb_000890_140--Hb_034498_010 Hb_005398_050 Hb_005398_050 Hb_000527_020--Hb_005398_050 Hb_128392_010 Hb_128392_010 Hb_000527_020--Hb_128392_010 Hb_021576_050 Hb_021576_050 Hb_000527_020--Hb_021576_050 Hb_001390_040 Hb_001390_040 Hb_000527_020--Hb_001390_040 Hb_006573_310 Hb_006573_310 Hb_000527_020--Hb_006573_310 Hb_003368_070--Hb_001699_070 Hb_000176_040 Hb_000176_040 Hb_003368_070--Hb_000176_040 Hb_002928_150 Hb_002928_150 Hb_003368_070--Hb_002928_150 Hb_001279_110 Hb_001279_110 Hb_003368_070--Hb_001279_110 Hb_119044_040 Hb_119044_040 Hb_003368_070--Hb_119044_040 Hb_001699_070--Hb_119044_040 Hb_003018_210 Hb_003018_210 Hb_001699_070--Hb_003018_210 Hb_003398_050 Hb_003398_050 Hb_001699_070--Hb_003398_050 Hb_003776_050 Hb_003776_050 Hb_001699_070--Hb_003776_050 Hb_000614_200 Hb_000614_200 Hb_001699_070--Hb_000614_200 Hb_001307_150 Hb_001307_150 Hb_000856_390--Hb_001307_150 Hb_016898_020 Hb_016898_020 Hb_000856_390--Hb_016898_020 Hb_000038_070 Hb_000038_070 Hb_000856_390--Hb_000038_070 Hb_000856_390--Hb_007245_030 Hb_000480_060 Hb_000480_060 Hb_000856_390--Hb_000480_060 Hb_000085_360 Hb_000085_360 Hb_000856_390--Hb_000085_360 Hb_005914_100 Hb_005914_100 Hb_007245_030--Hb_005914_100 Hb_007245_030--Hb_000614_200 Hb_001168_030 Hb_001168_030 Hb_007245_030--Hb_001168_030 Hb_000316_070 Hb_000316_070 Hb_007245_030--Hb_000316_070 Hb_007245_030--Hb_002928_150 Hb_004225_160 Hb_004225_160 Hb_007245_030--Hb_004225_160 Hb_022845_010 Hb_022845_010 Hb_034498_010--Hb_022845_010 Hb_005141_020 Hb_005141_020 Hb_034498_010--Hb_005141_020 Hb_034498_010--Hb_000527_020 Hb_001190_030 Hb_001190_030 Hb_034498_010--Hb_001190_030 Hb_001322_220 Hb_001322_220 Hb_034498_010--Hb_001322_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.20591 36.6657 20.0923 0.0394193 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.28737 0.594606

CAGE analysis