Hb_000527_020

Information

Type -
Description -
Location Contig527: 29379-30335
Sequence    

Annotation

kegg
ID rcu:RCOM_1062680
description hypothetical protein
nr
ID XP_012091540.1
description PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JN19
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21385 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47027: 29094-30488
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000527_020 0.0 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
2 Hb_000890_140 0.0754686732 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
3 Hb_005398_050 0.0776871625 - - PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas]
4 Hb_128392_010 0.0816665372 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Jatropha curcas]
5 Hb_021576_050 0.0818538947 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
6 Hb_001390_040 0.0848174995 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
7 Hb_006573_310 0.0868395447 - - Tellurite resistance protein tehA, putative [Ricinus communis]
8 Hb_003847_060 0.0889605384 - - syntaxin, putative [Ricinus communis]
9 Hb_000162_160 0.089513211 - - PREDICTED: auxin transporter-like protein 5 [Populus euphratica]
10 Hb_118282_020 0.0911360832 - - PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]
11 Hb_001307_150 0.0964619457 - - receptor protein kinase, putative [Ricinus communis]
12 Hb_078448_010 0.0976811184 - - hypothetical protein L484_017526 [Morus notabilis]
13 Hb_000856_390 0.1015680517 - - conserved hypothetical protein [Ricinus communis]
14 Hb_004774_080 0.1019774488 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003368_070 0.101985906 - - PREDICTED: uncharacterized protein LOC105109387 [Populus euphratica]
16 Hb_000056_290 0.1031892915 - - conserved hypothetical protein [Ricinus communis]
17 Hb_007245_030 0.1038087092 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000035_230 0.1044968116 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
19 Hb_034498_010 0.1062797372 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
20 Hb_000069_650 0.1134034696 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000527_020 Hb_000527_020 Hb_000890_140 Hb_000890_140 Hb_000527_020--Hb_000890_140 Hb_005398_050 Hb_005398_050 Hb_000527_020--Hb_005398_050 Hb_128392_010 Hb_128392_010 Hb_000527_020--Hb_128392_010 Hb_021576_050 Hb_021576_050 Hb_000527_020--Hb_021576_050 Hb_001390_040 Hb_001390_040 Hb_000527_020--Hb_001390_040 Hb_006573_310 Hb_006573_310 Hb_000527_020--Hb_006573_310 Hb_003368_070 Hb_003368_070 Hb_000890_140--Hb_003368_070 Hb_001699_070 Hb_001699_070 Hb_000890_140--Hb_001699_070 Hb_000856_390 Hb_000856_390 Hb_000890_140--Hb_000856_390 Hb_007245_030 Hb_007245_030 Hb_000890_140--Hb_007245_030 Hb_034498_010 Hb_034498_010 Hb_000890_140--Hb_034498_010 Hb_003847_060 Hb_003847_060 Hb_005398_050--Hb_003847_060 Hb_078448_010 Hb_078448_010 Hb_005398_050--Hb_078448_010 Hb_000035_230 Hb_000035_230 Hb_005398_050--Hb_000035_230 Hb_001307_150 Hb_001307_150 Hb_005398_050--Hb_001307_150 Hb_016898_020 Hb_016898_020 Hb_005398_050--Hb_016898_020 Hb_128392_010--Hb_021576_050 Hb_128392_010--Hb_000035_230 Hb_128392_010--Hb_003847_060 Hb_128392_010--Hb_005398_050 Hb_003464_010 Hb_003464_010 Hb_128392_010--Hb_003464_010 Hb_021576_050--Hb_003847_060 Hb_021576_050--Hb_000035_230 Hb_021576_050--Hb_005398_050 Hb_118282_020 Hb_118282_020 Hb_021576_050--Hb_118282_020 Hb_001390_040--Hb_001307_150 Hb_001390_040--Hb_000890_140 Hb_001390_040--Hb_000856_390 Hb_001390_040--Hb_003847_060 Hb_007474_020 Hb_007474_020 Hb_001390_040--Hb_007474_020 Hb_004774_080 Hb_004774_080 Hb_006573_310--Hb_004774_080 Hb_006573_310--Hb_007245_030 Hb_005914_100 Hb_005914_100 Hb_006573_310--Hb_005914_100 Hb_004241_160 Hb_004241_160 Hb_006573_310--Hb_004241_160 Hb_006573_310--Hb_078448_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.163652 1.00369 36.3664 24.4263 0.0437962 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0842201 0 1.32234 0.772801

CAGE analysis