Hb_003464_010

Information

Type -
Description -
Location Contig3464: 13624-16802
Sequence    

Annotation

kegg
ID rcu:RCOM_0840460
description hypothetical protein
nr
ID XP_002528632.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SRL3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0840460 PE=4 SV=1
Gene Ontology
ID GO:0016021
description sulfite exporter family protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36124: 13525-14427 , PASA_asmbl_36126: 15708-15912 , PASA_asmbl_36127: 16231-16956
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003464_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_012092_040 0.0809612371 - - PREDICTED: expansin-A1 isoform X1 [Jatropha curcas]
3 Hb_000445_260 0.0876469314 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
4 Hb_001329_050 0.0935633561 - - conserved hypothetical protein [Ricinus communis]
5 Hb_010080_050 0.0944682151 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
6 Hb_000390_010 0.0945595484 - - PREDICTED: protein CDI [Jatropha curcas]
7 Hb_000035_230 0.0963899441 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
8 Hb_000089_090 0.0988721489 - - hypothetical protein POPTR_0019s12670g [Populus trichocarpa]
9 Hb_001856_210 0.0990821441 - - PREDICTED: uncharacterized protein LOC105644171 [Jatropha curcas]
10 Hb_128392_010 0.1026283791 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Jatropha curcas]
11 Hb_002028_270 0.1029324808 - - Pectinesterase-1 precursor, putative [Ricinus communis]
12 Hb_005211_170 0.1031488754 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
13 Hb_089140_070 0.1050031762 - - PREDICTED: uncharacterized protein LOC105637961 [Jatropha curcas]
14 Hb_001971_040 0.1064821132 - - PREDICTED: beta-glucosidase 44-like [Jatropha curcas]
15 Hb_000878_080 0.106485824 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
16 Hb_002307_150 0.1067945971 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA4-like [Jatropha curcas]
17 Hb_001123_330 0.1096914505 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
18 Hb_004880_040 0.1107901814 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Jatropha curcas]
19 Hb_000289_020 0.1117460165 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
20 Hb_001247_060 0.1124144749 - - zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_003464_010 Hb_003464_010 Hb_012092_040 Hb_012092_040 Hb_003464_010--Hb_012092_040 Hb_000445_260 Hb_000445_260 Hb_003464_010--Hb_000445_260 Hb_001329_050 Hb_001329_050 Hb_003464_010--Hb_001329_050 Hb_010080_050 Hb_010080_050 Hb_003464_010--Hb_010080_050 Hb_000390_010 Hb_000390_010 Hb_003464_010--Hb_000390_010 Hb_000035_230 Hb_000035_230 Hb_003464_010--Hb_000035_230 Hb_000089_090 Hb_000089_090 Hb_012092_040--Hb_000089_090 Hb_001247_060 Hb_001247_060 Hb_012092_040--Hb_001247_060 Hb_089140_070 Hb_089140_070 Hb_012092_040--Hb_089140_070 Hb_012092_040--Hb_000035_230 Hb_012092_040--Hb_000390_010 Hb_000445_260--Hb_010080_050 Hb_001856_210 Hb_001856_210 Hb_000445_260--Hb_001856_210 Hb_005211_170 Hb_005211_170 Hb_000445_260--Hb_005211_170 Hb_002307_150 Hb_002307_150 Hb_000445_260--Hb_002307_150 Hb_000878_080 Hb_000878_080 Hb_000445_260--Hb_000878_080 Hb_000056_290 Hb_000056_290 Hb_001329_050--Hb_000056_290 Hb_000933_040 Hb_000933_040 Hb_001329_050--Hb_000933_040 Hb_001329_050--Hb_000878_080 Hb_120289_010 Hb_120289_010 Hb_001329_050--Hb_120289_010 Hb_078448_010 Hb_078448_010 Hb_001329_050--Hb_078448_010 Hb_010080_050--Hb_002307_150 Hb_010080_050--Hb_005211_170 Hb_001971_040 Hb_001971_040 Hb_010080_050--Hb_001971_040 Hb_010080_050--Hb_001856_210 Hb_010080_050--Hb_089140_070 Hb_000390_010--Hb_089140_070 Hb_000390_010--Hb_000035_230 Hb_000390_010--Hb_001971_040 Hb_001950_090 Hb_001950_090 Hb_000390_010--Hb_001950_090 Hb_000035_230--Hb_001247_060 Hb_000035_230--Hb_000089_090 Hb_003847_060 Hb_003847_060 Hb_000035_230--Hb_003847_060 Hb_005398_050 Hb_005398_050 Hb_000035_230--Hb_005398_050 Hb_128392_010 Hb_128392_010 Hb_000035_230--Hb_128392_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0270663 0.511283 8.71502 10.4272 0 0.0135336
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0308268 0 0 0.387164 0.507611

CAGE analysis