Hb_120289_010

Information

Type -
Description -
Location Contig120289: 4247-5386
Sequence    

Annotation

kegg
ID fve:101296821
description putative receptor-like protein kinase At3g47110-like
nr
ID XP_012073432.1
description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067L383
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00717 PE=4 SV=1
Gene Ontology
ID GO:0005515
description lrr receptor-like serine threonine-protein kinase efr

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120289_010 0.0 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
2 Hb_000056_290 0.0703754934 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000162_160 0.0896633623 - - PREDICTED: auxin transporter-like protein 5 [Populus euphratica]
4 Hb_022845_010 0.0898520512 - - PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Jatropha curcas]
5 Hb_000700_020 0.0918279783 - - PREDICTED: probable pectate lyase 8 [Jatropha curcas]
6 Hb_001329_050 0.1012597229 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001322_220 0.1115326656 - - Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]
8 Hb_109304_010 0.1201782953 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
9 Hb_006573_310 0.1213998461 - - Tellurite resistance protein tehA, putative [Ricinus communis]
10 Hb_001123_330 0.1216173826 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
11 Hb_002790_010 0.122017634 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
12 Hb_000527_020 0.1223800322 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
13 Hb_001190_030 0.1234969443 - - hypothetical protein VITISV_017115 [Vitis vinifera]
14 Hb_000654_060 0.1258141257 - - hypothetical protein CICLE_v10027550mg [Citrus clementina]
15 Hb_125781_010 0.1265094945 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
16 Hb_004774_080 0.1270490964 - - conserved hypothetical protein [Ricinus communis]
17 Hb_022465_010 0.1325518345 - - hypothetical protein JCGZ_06012 [Jatropha curcas]
18 Hb_078448_010 0.1341782239 - - hypothetical protein L484_017526 [Morus notabilis]
19 Hb_003680_180 0.1352953778 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
20 Hb_004092_020 0.136901844 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 32 [Jatropha curcas]

Gene co-expression network

sample Hb_120289_010 Hb_120289_010 Hb_000056_290 Hb_000056_290 Hb_120289_010--Hb_000056_290 Hb_000162_160 Hb_000162_160 Hb_120289_010--Hb_000162_160 Hb_022845_010 Hb_022845_010 Hb_120289_010--Hb_022845_010 Hb_000700_020 Hb_000700_020 Hb_120289_010--Hb_000700_020 Hb_001329_050 Hb_001329_050 Hb_120289_010--Hb_001329_050 Hb_001322_220 Hb_001322_220 Hb_120289_010--Hb_001322_220 Hb_000056_290--Hb_001329_050 Hb_006573_310 Hb_006573_310 Hb_000056_290--Hb_006573_310 Hb_000933_040 Hb_000933_040 Hb_000056_290--Hb_000933_040 Hb_078448_010 Hb_078448_010 Hb_000056_290--Hb_078448_010 Hb_000527_020 Hb_000527_020 Hb_000056_290--Hb_000527_020 Hb_000162_160--Hb_001322_220 Hb_000162_160--Hb_000527_020 Hb_001190_030 Hb_001190_030 Hb_000162_160--Hb_001190_030 Hb_056196_020 Hb_056196_020 Hb_000162_160--Hb_056196_020 Hb_000162_160--Hb_022845_010 Hb_022845_010--Hb_001322_220 Hb_022845_010--Hb_001190_030 Hb_000654_060 Hb_000654_060 Hb_022845_010--Hb_000654_060 Hb_152528_010 Hb_152528_010 Hb_022845_010--Hb_152528_010 Hb_064194_010 Hb_064194_010 Hb_000700_020--Hb_064194_010 Hb_000700_020--Hb_000056_290 Hb_109304_010 Hb_109304_010 Hb_000700_020--Hb_109304_010 Hb_000700_020--Hb_000162_160 Hb_128392_010 Hb_128392_010 Hb_000700_020--Hb_128392_010 Hb_001329_050--Hb_000933_040 Hb_003464_010 Hb_003464_010 Hb_001329_050--Hb_003464_010 Hb_000878_080 Hb_000878_080 Hb_001329_050--Hb_000878_080 Hb_001329_050--Hb_078448_010 Hb_001322_220--Hb_001190_030 Hb_000185_190 Hb_000185_190 Hb_001322_220--Hb_000185_190 Hb_015754_010 Hb_015754_010 Hb_001322_220--Hb_015754_010 Hb_001031_130 Hb_001031_130 Hb_001322_220--Hb_001031_130 Hb_002081_110 Hb_002081_110 Hb_001322_220--Hb_002081_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.194953 3.85333 3.05007 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0700382

CAGE analysis