Hb_118282_020

Information

Type -
Description -
Location Contig118282: 8090-10631
Sequence    

Annotation

kegg
ID vvi:104880231
description uncharacterized LOC104880231
nr
ID XP_012069071.1
description PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KXC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24850 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05462: 7902-10762
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_118282_020 0.0 - - PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]
2 Hb_004774_080 0.0799184055 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000527_020 0.0911360832 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
4 Hb_005398_050 0.09439437 - - PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas]
5 Hb_000418_040 0.0946371281 - - hypothetical protein RCOM_0377590 [Ricinus communis]
6 Hb_007474_020 0.098241509 - - multicopper oxidase, putative [Ricinus communis]
7 Hb_001307_150 0.1006145907 - - receptor protein kinase, putative [Ricinus communis]
8 Hb_006573_310 0.1011582929 - - Tellurite resistance protein tehA, putative [Ricinus communis]
9 Hb_078448_010 0.1024998329 - - hypothetical protein L484_017526 [Morus notabilis]
10 Hb_016898_020 0.1033891607 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105120899 [Populus euphratica]
11 Hb_021576_050 0.1049014229 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
12 Hb_001390_040 0.1083067066 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
13 Hb_003847_060 0.1092826627 - - syntaxin, putative [Ricinus communis]
14 Hb_009113_060 0.1108615515 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000056_290 0.1161284022 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000856_390 0.1217894315 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004619_090 0.1220395006 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000890_140 0.1225274169 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
19 Hb_000035_230 0.1233229106 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
20 Hb_001329_050 0.1251443408 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_118282_020 Hb_118282_020 Hb_004774_080 Hb_004774_080 Hb_118282_020--Hb_004774_080 Hb_000527_020 Hb_000527_020 Hb_118282_020--Hb_000527_020 Hb_005398_050 Hb_005398_050 Hb_118282_020--Hb_005398_050 Hb_000418_040 Hb_000418_040 Hb_118282_020--Hb_000418_040 Hb_007474_020 Hb_007474_020 Hb_118282_020--Hb_007474_020 Hb_001307_150 Hb_001307_150 Hb_118282_020--Hb_001307_150 Hb_006573_310 Hb_006573_310 Hb_004774_080--Hb_006573_310 Hb_000134_300 Hb_000134_300 Hb_004774_080--Hb_000134_300 Hb_003680_180 Hb_003680_180 Hb_004774_080--Hb_003680_180 Hb_034420_010 Hb_034420_010 Hb_004774_080--Hb_034420_010 Hb_004774_080--Hb_000527_020 Hb_000890_140 Hb_000890_140 Hb_000527_020--Hb_000890_140 Hb_000527_020--Hb_005398_050 Hb_128392_010 Hb_128392_010 Hb_000527_020--Hb_128392_010 Hb_021576_050 Hb_021576_050 Hb_000527_020--Hb_021576_050 Hb_001390_040 Hb_001390_040 Hb_000527_020--Hb_001390_040 Hb_000527_020--Hb_006573_310 Hb_003847_060 Hb_003847_060 Hb_005398_050--Hb_003847_060 Hb_078448_010 Hb_078448_010 Hb_005398_050--Hb_078448_010 Hb_000035_230 Hb_000035_230 Hb_005398_050--Hb_000035_230 Hb_005398_050--Hb_001307_150 Hb_016898_020 Hb_016898_020 Hb_005398_050--Hb_016898_020 Hb_000661_150 Hb_000661_150 Hb_000418_040--Hb_000661_150 Hb_004619_090 Hb_004619_090 Hb_000418_040--Hb_004619_090 Hb_059226_010 Hb_059226_010 Hb_000418_040--Hb_059226_010 Hb_001565_090 Hb_001565_090 Hb_000418_040--Hb_001565_090 Hb_000418_040--Hb_007474_020 Hb_101133_050 Hb_101133_050 Hb_007474_020--Hb_101133_050 Hb_007474_020--Hb_001390_040 Hb_000856_390 Hb_000856_390 Hb_007474_020--Hb_000856_390 Hb_007474_020--Hb_001307_150 Hb_000317_120 Hb_000317_120 Hb_007474_020--Hb_000317_120 Hb_001307_150--Hb_000856_390 Hb_000480_060 Hb_000480_060 Hb_001307_150--Hb_000480_060 Hb_001307_150--Hb_016898_020 Hb_001699_270 Hb_001699_270 Hb_001307_150--Hb_001699_270 Hb_001307_150--Hb_003847_060 Hb_000345_450 Hb_000345_450 Hb_001307_150--Hb_000345_450
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.351117 11.9936 8.55323 0.00943163 0.0185218
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0228986 0.108103 0.136616 0.372784 0.570931

CAGE analysis