Hb_001565_090

Information

Type -
Description -
Location Contig1565: 65253-74173
Sequence    

Annotation

kegg
ID rcu:RCOM_1049380
description ceramide glucosyltransferase, putative
nr
ID XP_012076865.1
description PREDICTED: uncharacterized protein LOC105637840 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KFP0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07364 PE=4 SV=1
Gene Ontology
ID GO:0016757
description nucleotide-diphospho-sugar transferases superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13612: 67400-67698
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001565_090 0.0 - - PREDICTED: uncharacterized protein LOC105637840 isoform X1 [Jatropha curcas]
2 Hb_000069_650 0.1023375757 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000661_150 0.1033821083 - - ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis]
4 Hb_000418_040 0.1052611033 - - hypothetical protein RCOM_0377590 [Ricinus communis]
5 Hb_007474_020 0.1141410607 - - multicopper oxidase, putative [Ricinus communis]
6 Hb_001377_370 0.1202284263 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
7 Hb_001390_040 0.1231183689 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
8 Hb_001699_270 0.1242091669 - - PREDICTED: uncharacterized protein LOC105628996 [Jatropha curcas]
9 Hb_001307_150 0.1254528394 - - receptor protein kinase, putative [Ricinus communis]
10 Hb_003847_060 0.1276639793 - - syntaxin, putative [Ricinus communis]
11 Hb_012150_040 0.1295364766 - - conserved hypothetical protein [Ricinus communis]
12 Hb_118282_020 0.1298093905 - - PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]
13 Hb_128392_010 0.1316528487 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Jatropha curcas]
14 Hb_001950_090 0.1354294996 - - PREDICTED: microtubule-associated protein RP/EB family member 1C [Jatropha curcas]
15 Hb_000856_390 0.1367958156 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004884_170 0.1370218863 - - hypothetical protein AALP_AA1G067000 [Arabis alpina]
17 Hb_000317_120 0.1371218808 - - PREDICTED: uncharacterized protein LOC105647000 [Jatropha curcas]
18 Hb_000527_020 0.1393964789 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
19 Hb_016898_020 0.1401444924 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105120899 [Populus euphratica]
20 Hb_003813_110 0.1408747135 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001565_090 Hb_001565_090 Hb_000069_650 Hb_000069_650 Hb_001565_090--Hb_000069_650 Hb_000661_150 Hb_000661_150 Hb_001565_090--Hb_000661_150 Hb_000418_040 Hb_000418_040 Hb_001565_090--Hb_000418_040 Hb_007474_020 Hb_007474_020 Hb_001565_090--Hb_007474_020 Hb_001377_370 Hb_001377_370 Hb_001565_090--Hb_001377_370 Hb_001390_040 Hb_001390_040 Hb_001565_090--Hb_001390_040 Hb_001950_090 Hb_001950_090 Hb_000069_650--Hb_001950_090 Hb_000069_650--Hb_001377_370 Hb_003847_060 Hb_003847_060 Hb_000069_650--Hb_003847_060 Hb_000069_650--Hb_001390_040 Hb_072201_010 Hb_072201_010 Hb_000069_650--Hb_072201_010 Hb_001699_270 Hb_001699_270 Hb_000661_150--Hb_001699_270 Hb_101133_050 Hb_101133_050 Hb_000661_150--Hb_101133_050 Hb_000661_150--Hb_001950_090 Hb_001688_100 Hb_001688_100 Hb_000661_150--Hb_001688_100 Hb_000661_150--Hb_000418_040 Hb_001307_150 Hb_001307_150 Hb_000661_150--Hb_001307_150 Hb_118282_020 Hb_118282_020 Hb_000418_040--Hb_118282_020 Hb_004619_090 Hb_004619_090 Hb_000418_040--Hb_004619_090 Hb_059226_010 Hb_059226_010 Hb_000418_040--Hb_059226_010 Hb_000418_040--Hb_007474_020 Hb_007474_020--Hb_101133_050 Hb_007474_020--Hb_001390_040 Hb_000856_390 Hb_000856_390 Hb_007474_020--Hb_000856_390 Hb_007474_020--Hb_001307_150 Hb_000317_120 Hb_000317_120 Hb_007474_020--Hb_000317_120 Hb_007474_020--Hb_118282_020 Hb_012150_040 Hb_012150_040 Hb_001377_370--Hb_012150_040 Hb_001377_370--Hb_001950_090 Hb_000289_020 Hb_000289_020 Hb_001377_370--Hb_000289_020 Hb_002028_270 Hb_002028_270 Hb_001377_370--Hb_002028_270 Hb_001377_370--Hb_000317_120 Hb_001390_040--Hb_001307_150 Hb_000527_020 Hb_000527_020 Hb_001390_040--Hb_000527_020 Hb_000890_140 Hb_000890_140 Hb_001390_040--Hb_000890_140 Hb_001390_040--Hb_000856_390 Hb_001390_040--Hb_003847_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0299227 0.0708468 1.1032 0.839254 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0178366 0.0338201 0.0922537 0.0376907

CAGE analysis