Hb_072201_010

Information

Type -
Description -
Location Contig72201: 1-848
Sequence    

Annotation

kegg
ID rcu:RCOM_1323160
description CDK, putative (EC:2.7.11.23)
nr
ID XP_012090971.1
description PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]
swissprot
ID Q2V419
description Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2
trembl
ID A0A067JD95
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00608 PE=4 SV=1
Gene Ontology
ID GO:0004672
description cell division control protein 2 homolog c

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_072201_010 0.0 - - PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]
2 Hb_000069_650 0.1019569579 - - conserved hypothetical protein [Ricinus communis]
3 Hb_012150_040 0.1023188477 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003847_060 0.1055937273 - - syntaxin, putative [Ricinus communis]
5 Hb_001950_090 0.1083213485 - - PREDICTED: microtubule-associated protein RP/EB family member 1C [Jatropha curcas]
6 Hb_021576_050 0.1088837687 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
7 Hb_000317_120 0.1156561769 - - PREDICTED: uncharacterized protein LOC105647000 [Jatropha curcas]
8 Hb_000661_150 0.1199582121 - - ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis]
9 Hb_001307_150 0.1213778439 - - receptor protein kinase, putative [Ricinus communis]
10 Hb_000856_390 0.1216109153 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001699_270 0.1246061719 - - PREDICTED: uncharacterized protein LOC105628996 [Jatropha curcas]
12 Hb_000527_020 0.124630432 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
13 Hb_003813_110 0.1265055987 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001377_370 0.1265720646 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
15 Hb_005398_050 0.1277104133 - - PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas]
16 Hb_000890_140 0.1284588097 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
17 Hb_128392_010 0.1284937268 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Jatropha curcas]
18 Hb_000345_450 0.1296491185 - - PREDICTED: microtubule-binding protein TANGLED [Jatropha curcas]
19 Hb_016898_020 0.1318817899 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105120899 [Populus euphratica]
20 Hb_118282_020 0.1349735252 - - PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_072201_010 Hb_072201_010 Hb_000069_650 Hb_000069_650 Hb_072201_010--Hb_000069_650 Hb_012150_040 Hb_012150_040 Hb_072201_010--Hb_012150_040 Hb_003847_060 Hb_003847_060 Hb_072201_010--Hb_003847_060 Hb_001950_090 Hb_001950_090 Hb_072201_010--Hb_001950_090 Hb_021576_050 Hb_021576_050 Hb_072201_010--Hb_021576_050 Hb_000317_120 Hb_000317_120 Hb_072201_010--Hb_000317_120 Hb_000069_650--Hb_001950_090 Hb_001377_370 Hb_001377_370 Hb_000069_650--Hb_001377_370 Hb_000069_650--Hb_003847_060 Hb_001390_040 Hb_001390_040 Hb_000069_650--Hb_001390_040 Hb_001565_090 Hb_001565_090 Hb_000069_650--Hb_001565_090 Hb_012150_040--Hb_000317_120 Hb_012150_040--Hb_001377_370 Hb_101133_050 Hb_101133_050 Hb_012150_040--Hb_101133_050 Hb_000661_150 Hb_000661_150 Hb_012150_040--Hb_000661_150 Hb_000742_180 Hb_000742_180 Hb_012150_040--Hb_000742_180 Hb_005398_050 Hb_005398_050 Hb_003847_060--Hb_005398_050 Hb_001307_150 Hb_001307_150 Hb_003847_060--Hb_001307_150 Hb_003847_060--Hb_001950_090 Hb_001699_270 Hb_001699_270 Hb_003847_060--Hb_001699_270 Hb_000856_390 Hb_000856_390 Hb_003847_060--Hb_000856_390 Hb_000480_060 Hb_000480_060 Hb_003847_060--Hb_000480_060 Hb_001950_090--Hb_001699_270 Hb_000345_450 Hb_000345_450 Hb_001950_090--Hb_000345_450 Hb_001950_090--Hb_000317_120 Hb_006588_100 Hb_006588_100 Hb_001950_090--Hb_006588_100 Hb_128392_010 Hb_128392_010 Hb_021576_050--Hb_128392_010 Hb_000527_020 Hb_000527_020 Hb_021576_050--Hb_000527_020 Hb_021576_050--Hb_003847_060 Hb_000035_230 Hb_000035_230 Hb_021576_050--Hb_000035_230 Hb_021576_050--Hb_005398_050 Hb_118282_020 Hb_118282_020 Hb_021576_050--Hb_118282_020 Hb_000317_120--Hb_000856_390 Hb_016898_020 Hb_016898_020 Hb_000317_120--Hb_016898_020 Hb_000576_140 Hb_000576_140 Hb_000317_120--Hb_000576_140 Hb_003106_090 Hb_003106_090 Hb_000317_120--Hb_003106_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.116925 0.918244 22.6441 17.0747 0.344965 0.335549
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.270699 0 0.125376 1.85365 0.416564

CAGE analysis