Hb_004774_080

Information

Type -
Description -
Location Contig4774: 88340-88966
Sequence    

Annotation

kegg
ID rcu:RCOM_0619120
description hypothetical protein
nr
ID XP_002528854.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SS85
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0619120 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004774_080 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_006573_310 0.0773820382 - - Tellurite resistance protein tehA, putative [Ricinus communis]
3 Hb_118282_020 0.0799184055 - - PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]
4 Hb_000134_300 0.0879629165 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_003680_180 0.0952648405 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
6 Hb_034420_010 0.099172912 - - glutathione S-transferase [Caragana korshinskii]
7 Hb_000527_020 0.1019774488 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
8 Hb_009113_060 0.1049322777 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000162_160 0.105444282 - - PREDICTED: auxin transporter-like protein 5 [Populus euphratica]
10 Hb_005398_050 0.1067138109 - - PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas]
11 Hb_078448_010 0.1069718897 - - hypothetical protein L484_017526 [Morus notabilis]
12 Hb_056196_020 0.1074135269 - - PREDICTED: uncharacterized protein LOC105631532 isoform X1 [Jatropha curcas]
13 Hb_021576_050 0.1096729679 - - PREDICTED: early nodulin-like protein 1 [Jatropha curcas]
14 Hb_000802_070 0.1107786361 - - PREDICTED: LOW QUALITY PROTEIN: eugenol synthase 1-like [Jatropha curcas]
15 Hb_002790_010 0.1120403721 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
16 Hb_004241_160 0.1174868583 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-7 [Jatropha curcas]
17 Hb_016898_020 0.1175139134 transcription factor TF Family: SET PREDICTED: uncharacterized protein LOC105120899 [Populus euphratica]
18 Hb_000056_290 0.1178634438 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005914_100 0.120025594 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000059_190 0.1243119845 - - PREDICTED: uncharacterized protein LOC105121874 [Populus euphratica]

Gene co-expression network

sample Hb_004774_080 Hb_004774_080 Hb_006573_310 Hb_006573_310 Hb_004774_080--Hb_006573_310 Hb_118282_020 Hb_118282_020 Hb_004774_080--Hb_118282_020 Hb_000134_300 Hb_000134_300 Hb_004774_080--Hb_000134_300 Hb_003680_180 Hb_003680_180 Hb_004774_080--Hb_003680_180 Hb_034420_010 Hb_034420_010 Hb_004774_080--Hb_034420_010 Hb_000527_020 Hb_000527_020 Hb_004774_080--Hb_000527_020 Hb_007245_030 Hb_007245_030 Hb_006573_310--Hb_007245_030 Hb_005914_100 Hb_005914_100 Hb_006573_310--Hb_005914_100 Hb_004241_160 Hb_004241_160 Hb_006573_310--Hb_004241_160 Hb_078448_010 Hb_078448_010 Hb_006573_310--Hb_078448_010 Hb_006573_310--Hb_000527_020 Hb_118282_020--Hb_000527_020 Hb_005398_050 Hb_005398_050 Hb_118282_020--Hb_005398_050 Hb_000418_040 Hb_000418_040 Hb_118282_020--Hb_000418_040 Hb_007474_020 Hb_007474_020 Hb_118282_020--Hb_007474_020 Hb_001307_150 Hb_001307_150 Hb_118282_020--Hb_001307_150 Hb_000802_070 Hb_000802_070 Hb_000134_300--Hb_000802_070 Hb_000059_190 Hb_000059_190 Hb_000134_300--Hb_000059_190 Hb_000134_300--Hb_003680_180 Hb_000134_300--Hb_034420_010 Hb_002790_010 Hb_002790_010 Hb_000134_300--Hb_002790_010 Hb_003680_180--Hb_000059_190 Hb_003680_180--Hb_002790_010 Hb_003680_180--Hb_000802_070 Hb_000175_080 Hb_000175_080 Hb_003680_180--Hb_000175_080 Hb_001123_330 Hb_001123_330 Hb_003680_180--Hb_001123_330 Hb_001257_070 Hb_001257_070 Hb_034420_010--Hb_001257_070 Hb_012395_040 Hb_012395_040 Hb_034420_010--Hb_012395_040 Hb_034420_010--Hb_000802_070 Hb_000671_020 Hb_000671_020 Hb_034420_010--Hb_000671_020 Hb_000394_120 Hb_000394_120 Hb_034420_010--Hb_000394_120 Hb_000890_140 Hb_000890_140 Hb_000527_020--Hb_000890_140 Hb_000527_020--Hb_005398_050 Hb_128392_010 Hb_128392_010 Hb_000527_020--Hb_128392_010 Hb_021576_050 Hb_021576_050 Hb_000527_020--Hb_021576_050 Hb_001390_040 Hb_001390_040 Hb_000527_020--Hb_001390_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.892802 75.7842 48.228 0 0.0528555
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.731292 1.03692 3.22704

CAGE analysis