Hb_034498_010

Information

Type -
Description -
Location Contig34498: 976-1612
Sequence    

Annotation

kegg
ID pop:POPTR_0001s46970g
description POPTRDRAFT_844305; hypothetical protein
nr
ID XP_012075600.1
description PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
swissprot
ID Q9SUC3
description Protein POLLENLESS 3 OS=Arabidopsis thaliana GN=MS5 PE=2 SV=2
trembl
ID A0A067KFB6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09209 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35971: 1130-1525
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034498_010 0.0 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
2 Hb_000890_140 0.0868820904 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
3 Hb_022845_010 0.1041359636 - - PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Jatropha curcas]
4 Hb_005141_020 0.1053154475 - - laccase, putative [Ricinus communis]
5 Hb_000527_020 0.1062797372 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
6 Hb_001190_030 0.1094610534 - - hypothetical protein VITISV_017115 [Vitis vinifera]
7 Hb_001322_220 0.1098248586 - - Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]
8 Hb_000162_160 0.1159947322 - - PREDICTED: auxin transporter-like protein 5 [Populus euphratica]
9 Hb_000654_060 0.1210751793 - - hypothetical protein CICLE_v10027550mg [Citrus clementina]
10 Hb_056196_020 0.1243356823 - - PREDICTED: uncharacterized protein LOC105631532 isoform X1 [Jatropha curcas]
11 Hb_003018_210 0.1243766231 - - PREDICTED: uncharacterized protein LOC105138721 isoform X2 [Populus euphratica]
12 Hb_006573_310 0.1247054867 - - Tellurite resistance protein tehA, putative [Ricinus communis]
13 Hb_000347_310 0.1287844728 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Jatropha curcas]
14 Hb_152528_010 0.1312808263 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
15 Hb_000056_290 0.1312992771 - - conserved hypothetical protein [Ricinus communis]
16 Hb_025163_020 0.1334121423 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
17 Hb_001699_070 0.1335842159 - - conserved hypothetical protein [Ricinus communis]
18 Hb_007245_030 0.1338668841 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004225_160 0.1368935688 - - PREDICTED: kiwellin-like [Jatropha curcas]
20 Hb_003368_070 0.1374999973 - - PREDICTED: uncharacterized protein LOC105109387 [Populus euphratica]

Gene co-expression network

sample Hb_034498_010 Hb_034498_010 Hb_000890_140 Hb_000890_140 Hb_034498_010--Hb_000890_140 Hb_022845_010 Hb_022845_010 Hb_034498_010--Hb_022845_010 Hb_005141_020 Hb_005141_020 Hb_034498_010--Hb_005141_020 Hb_000527_020 Hb_000527_020 Hb_034498_010--Hb_000527_020 Hb_001190_030 Hb_001190_030 Hb_034498_010--Hb_001190_030 Hb_001322_220 Hb_001322_220 Hb_034498_010--Hb_001322_220 Hb_000890_140--Hb_000527_020 Hb_003368_070 Hb_003368_070 Hb_000890_140--Hb_003368_070 Hb_001699_070 Hb_001699_070 Hb_000890_140--Hb_001699_070 Hb_000856_390 Hb_000856_390 Hb_000890_140--Hb_000856_390 Hb_007245_030 Hb_007245_030 Hb_000890_140--Hb_007245_030 Hb_022845_010--Hb_001322_220 Hb_022845_010--Hb_001190_030 Hb_000654_060 Hb_000654_060 Hb_022845_010--Hb_000654_060 Hb_120289_010 Hb_120289_010 Hb_022845_010--Hb_120289_010 Hb_152528_010 Hb_152528_010 Hb_022845_010--Hb_152528_010 Hb_000162_160 Hb_000162_160 Hb_022845_010--Hb_000162_160 Hb_003018_210 Hb_003018_210 Hb_005141_020--Hb_003018_210 Hb_000035_190 Hb_000035_190 Hb_005141_020--Hb_000035_190 Hb_002837_120 Hb_002837_120 Hb_005141_020--Hb_002837_120 Hb_004174_030 Hb_004174_030 Hb_005141_020--Hb_004174_030 Hb_000347_310 Hb_000347_310 Hb_005141_020--Hb_000347_310 Hb_005398_050 Hb_005398_050 Hb_000527_020--Hb_005398_050 Hb_128392_010 Hb_128392_010 Hb_000527_020--Hb_128392_010 Hb_021576_050 Hb_021576_050 Hb_000527_020--Hb_021576_050 Hb_001390_040 Hb_001390_040 Hb_000527_020--Hb_001390_040 Hb_006573_310 Hb_006573_310 Hb_000527_020--Hb_006573_310 Hb_001190_030--Hb_001322_220 Hb_002986_150 Hb_002986_150 Hb_001190_030--Hb_002986_150 Hb_001728_090 Hb_001728_090 Hb_001190_030--Hb_001728_090 Hb_003549_110 Hb_003549_110 Hb_001190_030--Hb_003549_110 Hb_004712_120 Hb_004712_120 Hb_001190_030--Hb_004712_120 Hb_000185_190 Hb_000185_190 Hb_001322_220--Hb_000185_190 Hb_015754_010 Hb_015754_010 Hb_001322_220--Hb_015754_010 Hb_001031_130 Hb_001031_130 Hb_001322_220--Hb_001031_130 Hb_002081_110 Hb_002081_110 Hb_001322_220--Hb_002081_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.466002 10.7751 5.81221 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.35431 0

CAGE analysis