Hb_001384_030

Information

Type -
Description -
Location Contig1384: 27327-27720
Sequence    

Annotation

kegg
ID mdm:103403886
description uncharacterized LOC103403886
nr
ID XP_010926849.1
description PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
swissprot
ID -
description -
trembl
ID A0A067KFD8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09234 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001384_030 0.0 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
2 Hb_074674_010 0.0131779978 - - Cell division cycle protein cdt2, putative [Ricinus communis]
3 Hb_001205_280 0.0637789003 - - PREDICTED: probable polyol transporter 6 [Jatropha curcas]
4 Hb_023386_070 0.0643670761 - - PREDICTED: probable pectinesterase 68 [Jatropha curcas]
5 Hb_046204_010 0.0690466883 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
6 Hb_061361_010 0.0867227646 - - kinase, putative [Ricinus communis]
7 Hb_010369_020 0.088242006 - - hypothetical protein JCGZ_21088 [Jatropha curcas]
8 Hb_000025_770 0.0920728992 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
9 Hb_000176_040 0.0987775915 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHR3 isoform X2 [Jatropha curcas]
10 Hb_000163_020 0.1013992866 - - -
11 Hb_033312_100 0.1032154152 - - -
12 Hb_000422_040 0.1036205141 - - hypothetical protein CICLE_v10013147mg [Citrus clementina]
13 Hb_003368_070 0.1149961237 - - PREDICTED: uncharacterized protein LOC105109387 [Populus euphratica]
14 Hb_000347_310 0.1186708219 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Jatropha curcas]
15 Hb_005066_050 0.1306286765 - - -
16 Hb_000890_140 0.1320329914 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
17 Hb_005306_060 0.1335888398 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Jatropha curcas]
18 Hb_002766_070 0.1391364081 transcription factor TF Family: MYB hypothetical protein JCGZ_17894 [Jatropha curcas]
19 Hb_002025_280 0.1398523763 - - PREDICTED: uncharacterized protein LOC105634201 [Jatropha curcas]
20 Hb_001699_070 0.1436467206 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001384_030 Hb_001384_030 Hb_074674_010 Hb_074674_010 Hb_001384_030--Hb_074674_010 Hb_001205_280 Hb_001205_280 Hb_001384_030--Hb_001205_280 Hb_023386_070 Hb_023386_070 Hb_001384_030--Hb_023386_070 Hb_046204_010 Hb_046204_010 Hb_001384_030--Hb_046204_010 Hb_061361_010 Hb_061361_010 Hb_001384_030--Hb_061361_010 Hb_010369_020 Hb_010369_020 Hb_001384_030--Hb_010369_020 Hb_074674_010--Hb_023386_070 Hb_074674_010--Hb_001205_280 Hb_074674_010--Hb_010369_020 Hb_074674_010--Hb_046204_010 Hb_074674_010--Hb_061361_010 Hb_001205_280--Hb_023386_070 Hb_001205_280--Hb_061361_010 Hb_000025_770 Hb_000025_770 Hb_001205_280--Hb_000025_770 Hb_000347_310 Hb_000347_310 Hb_001205_280--Hb_000347_310 Hb_023386_070--Hb_061361_010 Hb_023386_070--Hb_000025_770 Hb_023386_070--Hb_010369_020 Hb_007304_020 Hb_007304_020 Hb_046204_010--Hb_007304_020 Hb_033312_100 Hb_033312_100 Hb_046204_010--Hb_033312_100 Hb_000422_040 Hb_000422_040 Hb_046204_010--Hb_000422_040 Hb_000138_120 Hb_000138_120 Hb_046204_010--Hb_000138_120 Hb_061361_010--Hb_000025_770 Hb_005066_050 Hb_005066_050 Hb_061361_010--Hb_005066_050 Hb_000621_100 Hb_000621_100 Hb_061361_010--Hb_000621_100 Hb_000163_020 Hb_000163_020 Hb_010369_020--Hb_000163_020 Hb_005306_060 Hb_005306_060 Hb_010369_020--Hb_005306_060 Hb_010369_020--Hb_061361_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.95597 1.16292 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.203221 0

CAGE analysis