Hb_005066_050

Information

Type -
Description -
Location Contig5066: 42578-43063
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0008762
description reticuline oxidase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005066_050 0.0 - - -
2 Hb_000025_770 0.0453179799 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
3 Hb_061361_010 0.0509348032 - - kinase, putative [Ricinus communis]
4 Hb_000000_040 0.0773566774 - - PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Jatropha curcas]
5 Hb_000621_100 0.0887405243 - - conserved hypothetical protein [Ricinus communis]
6 Hb_008725_110 0.0951696538 - - PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas]
7 Hb_001205_280 0.0979399288 - - PREDICTED: probable polyol transporter 6 [Jatropha curcas]
8 Hb_006120_140 0.1014078054 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
9 Hb_023386_070 0.1100465636 - - PREDICTED: probable pectinesterase 68 [Jatropha curcas]
10 Hb_005141_020 0.1205763387 - - laccase, putative [Ricinus communis]
11 Hb_000347_310 0.1208114429 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Jatropha curcas]
12 Hb_020273_020 0.1233356636 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
13 Hb_000035_190 0.1237990196 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000227_020 0.1275527919 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
15 Hb_003018_210 0.127867583 - - PREDICTED: uncharacterized protein LOC105138721 isoform X2 [Populus euphratica]
16 Hb_000176_040 0.1302897731 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHR3 isoform X2 [Jatropha curcas]
17 Hb_000321_040 0.1303607832 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Jatropha curcas]
18 Hb_001384_030 0.1306286765 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
19 Hb_074674_010 0.1309526669 - - Cell division cycle protein cdt2, putative [Ricinus communis]
20 Hb_001235_040 0.1345276758 - - hypothetical protein POPTR_0001s47470g [Populus trichocarpa]

Gene co-expression network

sample Hb_005066_050 Hb_005066_050 Hb_000025_770 Hb_000025_770 Hb_005066_050--Hb_000025_770 Hb_061361_010 Hb_061361_010 Hb_005066_050--Hb_061361_010 Hb_000000_040 Hb_000000_040 Hb_005066_050--Hb_000000_040 Hb_000621_100 Hb_000621_100 Hb_005066_050--Hb_000621_100 Hb_008725_110 Hb_008725_110 Hb_005066_050--Hb_008725_110 Hb_001205_280 Hb_001205_280 Hb_005066_050--Hb_001205_280 Hb_000025_770--Hb_061361_010 Hb_000025_770--Hb_001205_280 Hb_023386_070 Hb_023386_070 Hb_000025_770--Hb_023386_070 Hb_000025_770--Hb_000621_100 Hb_074674_010 Hb_074674_010 Hb_000025_770--Hb_074674_010 Hb_061361_010--Hb_001205_280 Hb_061361_010--Hb_023386_070 Hb_061361_010--Hb_074674_010 Hb_061361_010--Hb_000621_100 Hb_020273_020 Hb_020273_020 Hb_000000_040--Hb_020273_020 Hb_006120_140 Hb_006120_140 Hb_000000_040--Hb_006120_140 Hb_000000_040--Hb_000621_100 Hb_000321_040 Hb_000321_040 Hb_000000_040--Hb_000321_040 Hb_000000_040--Hb_008725_110 Hb_000621_100--Hb_006120_140 Hb_000621_100--Hb_000321_040 Hb_001235_040 Hb_001235_040 Hb_008725_110--Hb_001235_040 Hb_008725_110--Hb_020273_020 Hb_124302_010 Hb_124302_010 Hb_008725_110--Hb_124302_010 Hb_000084_230 Hb_000084_230 Hb_008725_110--Hb_000084_230 Hb_001205_280--Hb_023386_070 Hb_001384_030 Hb_001384_030 Hb_001205_280--Hb_001384_030 Hb_001205_280--Hb_074674_010 Hb_000347_310 Hb_000347_310 Hb_001205_280--Hb_000347_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.475423 0.140713 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0460691 0

CAGE analysis