Hb_074674_010

Information

Type -
Description -
Location Contig74674: 18-3671
Sequence    

Annotation

kegg
ID rcu:RCOM_1064120
description Cell division cycle protein cdt2, putative
nr
ID XP_002521461.1
description Cell division cycle protein cdt2, putative [Ricinus communis]
swissprot
ID Q5ZJW8
description Denticleless protein homolog OS=Gallus gallus GN=DTL PE=2 SV=1
trembl
ID B9S642
description Cell division cycle protein cdt2, putative OS=Ricinus communis GN=RCOM_1064120 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074674_010 0.0 - - Cell division cycle protein cdt2, putative [Ricinus communis]
2 Hb_001384_030 0.0131779978 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
3 Hb_023386_070 0.0625795327 - - PREDICTED: probable pectinesterase 68 [Jatropha curcas]
4 Hb_001205_280 0.0678969753 - - PREDICTED: probable polyol transporter 6 [Jatropha curcas]
5 Hb_010369_020 0.07568843 - - hypothetical protein JCGZ_21088 [Jatropha curcas]
6 Hb_046204_010 0.0781451343 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
7 Hb_061361_010 0.0842450735 - - kinase, putative [Ricinus communis]
8 Hb_000163_020 0.08843975 - - -
9 Hb_000025_770 0.089865044 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
10 Hb_000176_040 0.0978551957 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHR3 isoform X2 [Jatropha curcas]
11 Hb_033312_100 0.1006463487 - - -
12 Hb_000422_040 0.1024293807 - - hypothetical protein CICLE_v10013147mg [Citrus clementina]
13 Hb_003368_070 0.1192228251 - - PREDICTED: uncharacterized protein LOC105109387 [Populus euphratica]
14 Hb_005306_060 0.1211571657 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 5 [Jatropha curcas]
15 Hb_000347_310 0.1295010759 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 3-like [Jatropha curcas]
16 Hb_005066_050 0.1309526669 - - -
17 Hb_002766_070 0.1321243906 transcription factor TF Family: MYB hypothetical protein JCGZ_17894 [Jatropha curcas]
18 Hb_002025_280 0.1340976982 - - PREDICTED: uncharacterized protein LOC105634201 [Jatropha curcas]
19 Hb_000890_140 0.1369930401 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
20 Hb_004197_020 0.1404636635 - - Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_074674_010 Hb_074674_010 Hb_001384_030 Hb_001384_030 Hb_074674_010--Hb_001384_030 Hb_023386_070 Hb_023386_070 Hb_074674_010--Hb_023386_070 Hb_001205_280 Hb_001205_280 Hb_074674_010--Hb_001205_280 Hb_010369_020 Hb_010369_020 Hb_074674_010--Hb_010369_020 Hb_046204_010 Hb_046204_010 Hb_074674_010--Hb_046204_010 Hb_061361_010 Hb_061361_010 Hb_074674_010--Hb_061361_010 Hb_001384_030--Hb_001205_280 Hb_001384_030--Hb_023386_070 Hb_001384_030--Hb_046204_010 Hb_001384_030--Hb_061361_010 Hb_001384_030--Hb_010369_020 Hb_023386_070--Hb_001205_280 Hb_023386_070--Hb_061361_010 Hb_000025_770 Hb_000025_770 Hb_023386_070--Hb_000025_770 Hb_023386_070--Hb_010369_020 Hb_001205_280--Hb_061361_010 Hb_001205_280--Hb_000025_770 Hb_000347_310 Hb_000347_310 Hb_001205_280--Hb_000347_310 Hb_000163_020 Hb_000163_020 Hb_010369_020--Hb_000163_020 Hb_005306_060 Hb_005306_060 Hb_010369_020--Hb_005306_060 Hb_010369_020--Hb_061361_010 Hb_007304_020 Hb_007304_020 Hb_046204_010--Hb_007304_020 Hb_033312_100 Hb_033312_100 Hb_046204_010--Hb_033312_100 Hb_000422_040 Hb_000422_040 Hb_046204_010--Hb_000422_040 Hb_000138_120 Hb_000138_120 Hb_046204_010--Hb_000138_120 Hb_061361_010--Hb_000025_770 Hb_005066_050 Hb_005066_050 Hb_061361_010--Hb_005066_050 Hb_000621_100 Hb_000621_100 Hb_061361_010--Hb_000621_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.334986 0.200556 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0395532 0

CAGE analysis